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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-TH
(Reference Set) 		Cotton-Graimondii_physical
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Correspondences
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Maps 5 Gr_Chr02
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 5
Map Start: 0 cM
Map Stop: 209.9 cM
Features by Type:
119 Marker
119 Total

Map Features

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Items 26 to 50 of 119.       Previous | of 5 | Next
Cotton - TH - 5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU3405 Marker 14.3 Cotton - HDC - 5 NAU3405 Marker 115.2 (cM) Automated name-based View Maps
Cotton - E3 - 19 NAU3405 Marker 20.2 (cM) Automated name-based View Maps
Cotton - HDC - 19 NAU3405 Marker 174.9 (cM) Automated name-based View Maps
Cotton - TH - 19 NAU3405 Marker 11.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU3405 Marker Cotton 2,044,989 - 2,045,710 (bp) Automated name-based View Maps
BNL3241 Marker 152.1 Cotton - HDC - 5 BNL3241 Marker 43.2 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL3241 Marker 132.27 (cM) Automated name-based View Maps
NAU2865 Marker 15.9 Cotton - HDC - 5 CLU4155 Marker 115 (cM) Automated name-based View Maps
JESPR184 Marker 153 Cotton - HDC - 22 JESPR184 Marker 45.5 (cM) Automated name-based View Maps
Cotton - T3 - 22 JESPR184 Marker 53.42 (cM) Automated name-based View Maps
Cotton - HDC - 5 JESPR184 Marker 44.3 (cM) Automated name-based View Maps
Cotton - TH - 22 JESPR184 Marker 52.7 (cM) Automated name-based View Maps
NAU3826 Marker 17 Cotton - TH - 19 NAU3826 Marker 13.5 (cM) Automated name-based View Maps
Cotton - HDC - 5 NAU3826 Marker 114.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU3826 Marker Cotton 2,403,519 - 2,404,347 (bp) Automated name-based View Maps
Cotton - HDC - 19 NAU3826 Marker 173.2 (cM) Automated name-based View Maps
ME8OD10-120 Marker 153.7 Cotton - HDC - 5 ME8OD10-120 Marker 43.8 (cM) Automated name-based View Maps
Y1355-195 Marker 17.6 Cotton - HDC - 5 Y1355-195 Marker 114.9 (cM) Automated name-based View Maps
NAU2562 Marker 154.7 Cotton - E3 - 5 NAU2562 Marker 197.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU4031 Marker 40.3 (cM) Automated name-based View Maps
NAU3828 Marker 19 Cotton - E3 - 5 NAU3828 Marker 37.6 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU3867 Marker 167.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU3867 Marker 114.7 (cM) Automated name-based View Maps
E14M2-315 Marker 156.4 Cotton - HDC - 5 E14M2-315 Marker 41.8 (cM) Automated name-based View Maps
NAU3737 Marker 19.3 Cotton - E3 - 5 NAU3737 Marker 13.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU3838 Marker 114.7 (cM) Automated name-based View Maps
Y1321-150 Marker 157.4 Cotton - HDC - 5 Y1321-150 Marker 41.1 (cM) Automated name-based View Maps
BNL3452 Marker 24 Cotton - Guazuncho2xVH8-RIL - c19 BNL3452 Marker 8.09 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU37 Marker 163.5 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL3452 Marker 35.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU37 Marker 114.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL3452 Marker 13.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL3452 Marker 31.5 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL3452 Marker 22.74 (cM) Automated name-based View Maps
Cotton - PK - D08 BNL3452 Marker 26.5 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL3452 Marker 196.4 (cM) Automated name-based View Maps
Cotton - T3 - 19 BNL3452 Marker 22.59 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL3452 Marker 25.7 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL3452 Marker 22.8 (cM) Automated name-based View Maps
NAU2561 Marker 158.5 Cotton - HDC - 5 CLU4031 Marker 40.3 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU2561 Marker 207.2 (cM) Automated name-based View Maps
NAU2000 Marker 25 Cotton - Graimondii_physical - Gr_Chr10 NAU2000 Marker Cotton 3,759,547 - 3,760,245 (bp) Automated name-based View Maps
Cotton - HDC - 5 NAU2000 Marker 114 (cM) Automated name-based View Maps
NAU6109 Marker 161.7 Cotton - HDC - 22 NAU6109 Marker 38.6 (cM) Automated name-based View Maps
Cotton - HDC - 5 NAU6109 Marker 38 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU6109 Marker 38.3 (cM) Automated name-based View Maps
NAU5392 Marker 26.7 Cotton - E3 - 13 NAU5392 Marker 96.1 (cM) Automated name-based View Maps
Cotton - HDC - 13 NAU5392 Marker 82.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 NAU5392 Marker 113.7 (cM) Automated name-based View Maps
Cotton - E3 - 18 NAU5392 Marker 78.4 (cM) Automated name-based View Maps
Cotton - HDC - 18 NAU5392 Marker 62.9 (cM) Automated name-based View Maps
NAU3402 Marker 162.1 Cotton - E3 - 5 NAU3402 Marker 179.2 (cM) Automated name-based View Maps
Cotton - HDC - 5 NAU3402 Marker 37.7 (cM) Automated name-based View Maps
NAU3269 Marker 30.9 Cotton - Graimondii_physical - Gr_Chr09 NAU3269 Marker Cotton 2,818,590 - 2,819,395 (bp) Automated name-based View Maps
Cotton - HDC - 5 NAU3269 Marker 112.9 (cM) Automated name-based View Maps
NAU5400 Marker 163.9 Cotton - HDC - 3 CLU1381 Marker 77.9 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU5400 Marker 180.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU1381 Marker 35.4 (cM) Automated name-based View Maps
BNL3020 Marker 39.3 Cotton - TH - 19 BNL3020 Marker 32.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL3020 Marker 111.4 (cM) Automated name-based View Maps
Cotton - T3 - 19 BNL3020 Marker 25.26 (cM) Automated name-based View Maps
Cotton - HDC - 19 BNL3020 Marker 160.9 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL3020 Marker 66 (cM) Automated name-based View Maps
NAU3382 Marker 165.3 Cotton - E3 - 3 NAU3382 Marker 84.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU1381 Marker 35.4 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1381 Marker 77.9 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU3382 Marker 178.9 (cM) Automated name-based View Maps
NAU3094 Marker 42.7 Cotton - HDC - 21 CLU4169 Marker 117.8 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU4169 Marker 70.4 (cM) Automated name-based View Maps
Cotton - E3 - 21 NAU3094 Marker 118.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU4169 Marker 110.7 (cM) Automated name-based View Maps
JESPR065 Marker 166.5 Cotton - GVc - 22 JESPR065 Marker 73 (cM) Automated name-based View Maps
Cotton - HDC - 5 JESPR065 Marker 34.5 (cM) Automated name-based View Maps
Cotton - HDC - 7 JESPR065 Marker 88.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 JESPR065 Marker 108.2 (cM) Automated name-based View Maps
Cotton - GVc - 7 JESPR065 Marker 59.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 JESPR065a Marker 6.62 (cM) Automated name-based View Maps
Cotton - GVc - 5 JESPR065 Marker 108.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 JESPR065c Marker 32.03 (cM) Automated name-based View Maps
Cotton - T3 - 5 JESPR065 Marker 140.19 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 JESPR065 Marker 15.2 (cM) Automated name-based View Maps
Cotton - HDC - 22 JESPR065 Marker 33.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 JESPR065d Marker 59.76 (cM) Automated name-based View Maps
Cotton - GVc - 21 JESPR065 Marker 17.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 JESPR065 Marker 137.7 (cM) Automated name-based View Maps
Cotton - TH - 22 JESPR065 Marker 27.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 JESPR065 Marker 287.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 JESPR065b Marker 87.45 (cM) Automated name-based View Maps
Cotton - TH - 7 JESPR065 Marker 55.4 (cM) Automated name-based View Maps
Cotton - HDC - 21 JESPR065 Marker 156.1 (cM) Automated name-based View Maps
NAU2494 Marker 44.6 Cotton - HDC - 5 CLU4009 Marker 110.4 (cM) Automated name-based View Maps