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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Sugarcane-R570AF_Hoarau_2001
(Reference Set)
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Correspondences
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Maps group56
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sugarcane - R570AF_Hoarau_2001 [ View Map Set Info ]
Map Name: group56
Map Start: 0 cM
Map Stop: 144.6 cM
Features by Type:
18 Marker
18 Total

Map Features

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Items 1 to 18 of 18.
Sugarcane - R570AF_Hoarau_2001 - group56
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
actcac10 Marker 99 Sugarcane - MQ7653_Raboin_2006 - group3 actcac10 Marker 90.3 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - U52 actcac10 Marker 60 (cM) Automated name-based View Maps
acgcta8 Marker 20.6 Sugarcane - MQ7653_Raboin_2006 - group13 acgcta8 Marker 34.7 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group12 acgcta8 Marker 100.7 (cM) Automated name-based View Maps
acgcag10 Marker 0 Sugarcane - MQ7653_Raboin_2006 - group38 acgcag10 Marker 0 (cM) Automated name-based View Maps
agcctaK Marker 11.8 Sugarcane - R570_Raboin_2006 - group12 agcctaK Marker 112 (cM) Automated name-based View Maps
actctg13 Marker 134.1 Sugarcane - R570_Raboin_2006 - group12 actctg13 Marker 9.3 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - U52 actctg13 Marker 116.7 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group163 actctg13 Marker 45.1 (cM) Automated name-based View Maps
actctgI Marker 3 No other positions
accctc23 Marker 94.1 Sugarcane - R570AF_Rossi_2003 - U52 accctc23 Marker 53.3 (cM) Automated name-based View Maps
acccac14 Marker 68 Sugarcane - MQ7653_Raboin_2006 - group39 acccac14 Marker 5.4 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - U52 acccac14 Marker 22.7 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group12 acccac14 Marker 40.9 (cM) Automated name-based View Maps
aagctt21 Marker 144.6 No other positions
aagctt35 Marker 71.1 Sugarcane - R570AF_Rossi_2003 - U52 aagctt35 Marker 28 (cM) Automated name-based View Maps
aagctt12 Marker 67.2 Sugarcane - R570AF_Rossi_2003 - U52 aagctt12 Marker 21.5 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group12 aagctt12 Marker 42 (cM) Automated name-based View Maps
aagctt20 Marker 66.8 Sugarcane - R570_Raboin_2006 - group12 aagctt20 Marker 42.5 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - U52 aagctt20 Marker 21.5 (cM) Automated name-based View Maps
acactt12 Marker 80.9 Sugarcane - MQ7653_Raboin_2006 - group103 acactt12 Marker 76.3 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - U52 acactt12 Marker 39.8 (cM) Automated name-based View Maps
acactt4 Marker 43.5 Sugarcane - MQ7653_Raboin_2006 - group64 acactt4 Marker 62.6 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - U52 acactt4 Marker 0 (cM) Automated name-based View Maps
aagcta40 Marker 115 Sugarcane - R570AF_Rossi_2003 - U52 aagcta40 Marker 94.1 (cM) Automated name-based View Maps
acactg7 Marker 107.6 Sugarcane - R570_Raboin_2006 - group12 acactg7 Marker 26.8 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group47 acactg7 Marker 111.3 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - U52 acactg7 Marker 86.9 (cM) Automated name-based View Maps
aagctc2D Marker 64.5 Sugarcane - R570AF_Rossi_2003 - U52 aagctc2D Marker 18.2 (cM) Automated name-based View Maps
accctgR Marker 130.4 Sugarcane - R570AF_Rossi_2003 - U52 accctgR Marker 109.7 (cM) Automated name-based View Maps