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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-E3
(Reference Set)
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Correspondences
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Maps 12
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 12
Map Start: 0 cM
Map Stop: 222.3 cM
Features by Type:
87 Marker
87 Total

Map Features

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Items 1 to 25 of 87.       of 4 | Next
Cotton - E3 - 12
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
JESPR300 Marker 210 Cotton - TH - 12 JESPR300 Marker 149.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 JESPR300 Marker 5.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c26 JESPR300b Marker 1.13 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 JESPR300 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 26 JESPR300 Marker 109.91 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU2020 Marker 142.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 JESPR300a Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 26 JESPR300 Marker 123.7 (cM) Automated name-based View Maps
Cotton - GVc - 12 JESPR300 Marker 2.7 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU2020 Marker 112.9 (cM) Automated name-based View Maps
Cotton - GVc - 26 JESPR300 Marker 1.5 (cM) Automated name-based View Maps
Cotton - T3 - 12 JESPR300 Marker 120.31 (cM) Automated name-based View Maps
BNL4059 Marker 206.9 Cotton - Guazuncho2xVH8-BC1 - c12 BNL4059 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL4059 Marker 114.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c12 BNL4059 Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 12 BNL4059 Marker 144.9 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL4059 Marker 10.7 (cM) Automated name-based View Maps
Cotton - PK - c12 BNL4059 Marker 5.9 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL4059 Marker 6.9 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL4059 Marker 112.1 (cM) Automated name-based View Maps
Cotton - PK - c12 BNL4059 Marker 0 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL4059 Marker Cotton 55,860,116 - 55,860,739 (bp) Automated name-based View Maps
BNL1441 Marker 206 Cotton - HDC - 12 BNL1441 Marker 110.8 (cM) Automated name-based View Maps
NAU1301 Marker 205.1 Cotton - HDC - 12 NAU1301 Marker 109.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU1301 Marker Cotton 55,697,008 - 55,697,557 (bp) Automated name-based View Maps
Cotton - CH - 12 NAU1301 Marker 19.3 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU1301 Marker 141.3 (cM) Automated name-based View Maps
DPL0443 Marker 204.2 Cotton - T3 - 12 DPL0443 Marker 122.78 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU184 Marker 152.7 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU184 Marker 115.4 (cM) Automated name-based View Maps
HAU1321 Marker 198 Cotton - HDC - 12 CLU1009 Marker 105.6 (cM) Automated name-based View Maps
HAU2748 Marker 196.7 Cotton - HDC - 12 HAU2748 Marker 104.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 HAU2748 Marker Cotton 4,848,513 - 4,849,324 (bp) Automated name-based View Maps
HAU2229 Marker 196 Cotton - HDC - 12 CLU1009 Marker 105.6 (cM) Automated name-based View Maps
NAU3778 Marker 195.1 Cotton - TH - 12 NAU3778 Marker 132.9 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU3778 Marker 103.9 (cM) Automated name-based View Maps
CIR362 Marker 193.9 Cotton - Guazuncho2xVH8-BC1 - c12 CIR362 Marker 22.7 (cM) Automated name-based View Maps
Cotton - CH - 12 CIR362 Marker 29.1 (cM) Automated name-based View Maps
Cotton - TH - 12 CIR362 Marker 130 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 CIR362 Marker 7.98 (cM) Automated name-based View Maps
Cotton - HDC - 12 CIR362 Marker 102 (cM) Automated name-based View Maps
Cotton - GVc - 12 CIR362 Marker 18.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 CIR362 Marker Cotton 54,879,560 - 54,879,917 (bp) Automated name-based View Maps
HAU1568 Marker 188.4 Cotton - HDC - 12 HAU1568 Marker 100.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 HAU1568 Marker Cotton 54,518,014 - 54,518,829 (bp) Automated name-based View Maps
HAU0567 Marker 184.6 Cotton - HDC - 12 CLU623 Marker 98.8 (cM) Automated name-based View Maps
HAU1137 Marker 180.9 Cotton - HDC - 12 CLU920 Marker 97.6 (cM) Automated name-based View Maps
NAU3860 Marker 180.1 Cotton - HDC - 26 CLU1371 Marker 122.1 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU1371 Marker 97.3 (cM) Automated name-based View Maps
Cotton - E3 - 26 NAU3860 Marker 115.2 (cM) Automated name-based View Maps
NAU2251 Marker 177.3 Cotton - T3 - 12 NAU2251 Marker 108.67 (cM) Automated name-based View Maps
Cotton - E3 - 26 NAU2251 Marker 112.5 (cM) Automated name-based View Maps
Cotton - T3 - 26 NAU2251 Marker 90.27 (cM) Automated name-based View Maps
Cotton - TH - 26 NAU2251 Marker 102.5 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU1371 Marker 122.1 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU2251 Marker 121.1 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU1371 Marker 97.3 (cM) Automated name-based View Maps
STV130 Marker 176.8 Cotton - HDC - 12 CLU920 Marker 97.6 (cM) Automated name-based View Maps
BNL0598 Marker 173.8 Cotton - TH - 12 BNL0598 Marker 119 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL598 Marker 34.9 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL0598 Marker 31.6 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL0598 Marker 53.5 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL0598 Marker 105.11 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU61 Marker 92.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c12 BNL598 Marker 22.2 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL0598 Marker 92.7 (cM) Automated name-based View Maps
BNL3414 Marker 172.9 Cotton - HDC - 12 BNL3414 Marker 95.1 (cM) Automated name-based View Maps
MGHES31 Marker 172.6 Cotton - HDC - 12 CLU2064 Marker 95 (cM) Automated name-based View Maps
Cotton - CH - 26 MGHES31 Marker 87.5 (cM) Automated name-based View Maps
Cotton - GVc - 12 MGHES31 Marker 28.2 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU2064 Marker 85 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 MGHES-31 Marker 31.3 (cM) Automated name-based View Maps
NAU2868 Marker 172.5 Cotton - TH - 26 NAU2868 Marker 96.5 (cM) Automated name-based View Maps
Cotton - E3 - 26 NAU2868 Marker 103.7 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU2868 Marker 90.5 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU2868 Marker 117.5 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU2868 Marker 116.1 (cM) Automated name-based View Maps
HAU0717 Marker 172.5 Cotton - E3 - 26 HAU0717 Marker 108.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 HAU0717 Marker Cotton 53,385,149 - 53,386,360 (bp) Automated name-based View Maps
Cotton - HDC - 12 HAU0717 Marker 90.5 (cM) Automated name-based View Maps
NAU2640 Marker 172.1 Cotton - Graimondii_physical - Gr_Chr08 NAU2640 Marker Cotton 53,274,406 - 53,275,292 (bp) Automated name-based View Maps
Cotton - TH - 16 NAU2640 Marker 83.7 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU2640 Marker 43.6 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU2640 Marker 90 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU2640 Marker 117.2 (cM) Automated name-based View Maps
NAU2672 Marker 170.2 Cotton - HDC - 4 NAU2672 Marker 48.3 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU2672 Marker 89.7 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU2672 Marker 86.3 (cM) Automated name-based View Maps
NAU2671 Marker 162.1 Cotton - TH - 12 NAU2671 Marker 117.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU2671 Marker Cotton 53,292,907 - 53,293,674 (bp) Automated name-based View Maps
Cotton - HDC - 12 NAU2671 Marker 90.5 (cM) Automated name-based View Maps
HAU1454 Marker 157.4 Cotton - HDC - 12 HAU1454 Marker 87.4 (cM) Automated name-based View Maps