CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 17
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 17
Map Start: 0 cM
Map Stop: 145.7 cM
Features by Type:
66 Marker
66 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 66.       of 3 | Next
Cotton - E3 - 17
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
HAU1486 Marker 86.7 Cotton - HDC - 17 CLU1074 Marker 65.7 (cM) Automated name-based View Maps
BNL4003 Marker 86.2 Cotton - HDC - 2 CLU35 Marker 65 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL4003 Marker 43.04 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU35 Marker 71.1 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL4003 Marker 67.9 (cM) Automated name-based View Maps
NAU3700 Marker 85.4 Cotton - HDC - 17 CLU857 Marker 66.5 (cM) Automated name-based View Maps
Cotton - TH - 17 NAU3700 Marker 54.9 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU857 Marker 78.5 (cM) Automated name-based View Maps
BNL2182 Marker 83.9 Cotton - TH - 17 BNL2182 Marker 61 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL2182 Marker 79.2 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2182 Marker 71.6 (cM) Automated name-based View Maps
DPL0058 Marker 83.4 Cotton - T3 - 17 DPL0058 Marker 46.61 (cM) Automated name-based View Maps
Cotton - HDC - 17 DPL0058 Marker 67.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 DPL0058 Marker Cotton 8,153,971 - 8,154,663 (bp) Automated name-based View Maps
NAU2994 Marker 83.2 Cotton - HDC - 2 CLU2630 Marker 57.1 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU2630 Marker 77.7 (cM) Automated name-based View Maps
Cotton - TH - 17 NAU2994 Marker 55.7 (cM) Automated name-based View Maps
Cotton - TH - 2 NAU2994 Marker 52.2 (cM) Automated name-based View Maps
HAU1967 Marker 82.8 Cotton - HDC - 17 HAU1967 Marker 67.7 (cM) Automated name-based View Maps
BNL2471 Marker 82 Cotton - GVc - 17 BNL2471 Marker 30.5 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL2471 Marker 52.3 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL2471 Marker 80.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL2471 Marker 44.3 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2471 Marker 67.7 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL2471 Marker 75.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL2471 Marker Cotton 22,722,030 - 22,722,271 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL2471a Marker 32.88 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2471 Marker 50.2 (cM) Automated name-based View Maps
CIR038 Marker 81.7 Cotton - Graimondii_physical - Gr_Chr03 CIR038 Marker Cotton 21,801,845 - 21,802,011 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR038 Marker 44.3 (cM) Automated name-based View Maps
Cotton - GVc - 17 CIR038 Marker 30.2 (cM) Automated name-based View Maps
Cotton - HDC - 17 CIR038 Marker 68.1 (cM) Automated name-based View Maps
Cotton - CH - 17 CIR038 Marker 76.9 (cM) Automated name-based View Maps
NAU3639 Marker 81.3 Cotton - Graimondii_physical - Gr_Chr03 NAU3639 Marker Cotton 16,507,015 - 16,507,648 (bp) Automated name-based View Maps
Cotton - TH - 17 NAU3639 Marker 56.5 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU3639 Marker 43.2 (cM) Automated name-based View Maps
Cotton - HDC - 17 NAU3639 Marker 76.8 (cM) Automated name-based View Maps
NAU2909 Marker 81.2 Cotton - HDC - 17 CLU4171 Marker 70.3 (cM) Automated name-based View Maps
NAU6234 Marker 81.1 Cotton - TH - 17 NAU6234 Marker 55.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 NAU6234 Marker 77.6 (cM) Automated name-based View Maps
BNL2742 Marker 81 Cotton - HDC - 17 BNL2742 Marker 71.2 (cM) Automated name-based View Maps
TMB0349 Marker 81 Cotton - T3 - 17 TMB0349 Marker 47.32 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 TMB0349 Marker Cotton 6,318,855 - 6,319,577 (bp) Automated name-based View Maps
Cotton - HDC - 17 TMB0349 Marker 67 (cM) Automated name-based View Maps
HAU1024 Marker 80.9 Cotton - Graimondii_physical - Gr_Chr03 HAU1024 Marker Cotton 21,951,890 - 21,952,941 (bp) Automated name-based View Maps
Cotton - HDC - 17 HAU1024 Marker 71.6 (cM) Automated name-based View Maps
NAU2662 Marker 80.4 Cotton - HDC - 17 NAU2662 Marker 73.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 NAU2662 Marker Cotton 22,460,511 - 22,461,268 (bp) Automated name-based View Maps
Cotton - TH - 17 NAU2662 Marker 59.1 (cM) Automated name-based View Maps
TMB2939 Marker 80.2 Cotton - Graimondii_physical - Gr_Chr03 TMB2939 Marker Cotton 19,283,355 - 19,284,070 (bp) Automated name-based View Maps
Cotton - T3 - 17 TMB2939 Marker 43.26 (cM) Automated name-based View Maps
Cotton - HDC - 17 TMB2939 Marker 70.8 (cM) Automated name-based View Maps
TMB2081 Marker 80.1 Cotton - Graimondii_physical - Gr_Chr03 TMB2081 Marker Cotton 16,867,567 - 16,868,249 (bp) Automated name-based View Maps
Cotton - HDC - 17 TMB2081 Marker 70.1 (cM) Automated name-based View Maps
Cotton - T3 - 17 TMB2081 Marker 43.99 (cM) Automated name-based View Maps
NAU5443 Marker 79.7 Cotton - E3 - 3 NAU5443 Marker 80.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1853 Marker 81.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU1853 Marker 75.1 (cM) Automated name-based View Maps
NAU3309 Marker 79.7 Cotton - HDC - 3 CLU4319 Marker 82.7 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU4319 Marker 75.1 (cM) Automated name-based View Maps
Cotton - E3 - 3 NAU3309 Marker 79.3 (cM) Automated name-based View Maps
HAU3176 Marker 79.1 Cotton - HDC - 17 CLU1853 Marker 75.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1853 Marker 81.8 (cM) Automated name-based View Maps
Cotton - E3 - 3 HAU3176 Marker 72.7 (cM) Automated name-based View Maps
NAU6542 Marker 78.2 Cotton - HDC - 12 NAU6542 Marker 46.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 NAU6542 Marker 77.7 (cM) Automated name-based View Maps
Cotton - TH - 17 NAU6542 Marker 55.7 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU6542 Marker 65.9 (cM) Automated name-based View Maps
HAU0625 Marker 77.6 Cotton - Graimondii_physical - Gr_Chr03 HAU0625 Marker Cotton 29,619,940 - 29,621,278 (bp) Automated name-based View Maps
Cotton - HDC - 17 HAU0625 Marker 78.3 (cM) Automated name-based View Maps
NAU3884 Marker 76.5 Cotton - HDC - 17 CLU3882 Marker 79.6 (cM) Automated name-based View Maps
Cotton - TH - 17 NAU3884 Marker 53.9 (cM) Automated name-based View Maps
BNL4073 Marker 76.5 Cotton - HDC - 17 BNL4073 Marker 73.2 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL4073 Marker 40.63 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL4073 Marker Cotton 34,512,285 - 34,512,694 (bp) Automated name-based View Maps