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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Guazuncho2xVH8-BC2
(Reference Set)
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Correspondences
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Maps D02
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-BC2 [ View Map Set Info ]
Map Name: D02
Map Start: 0 cM
Map Stop: 143.4 cM
Features by Type:
18 Marker
18 Total

Map Features

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Items 1 to 18 of 18.
Cotton - Guazuncho2xVH8-BC2 - D02
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E7M5_102 Marker 0 Cotton - Guazuncho2xVH8-BC1 - D02 E7M5_102 Marker 17.6 (cM) Automated name-based View Maps
Cotton - GVc - 21 E7M5_102 Marker 22 (cM) Automated name-based View Maps
Cotton - HDC - 21 E7M5_102 Marker 151.8 (cM) Automated name-based View Maps
BNL1231 Marker 10.1 Cotton - T3 - 11 BNL1231 Marker 140.86 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL1231 Marker 144.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 BNL1231 Marker Cotton 57,124,940 - 57,125,230 (bp) Automated name-based View Maps
Cotton - PK - A03 BNL1231 Marker 13.1 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL1231 Marker 30.5 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL1231 Marker 183.9 (cM) Automated name-based View Maps
Cotton - TH - 11 BNL1231 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 21 BNL1231 Marker 113.36 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 BNL1231 Marker 31.3 (cM) Automated name-based View Maps
Cotton - PK - D02 BNL1231 Marker 10.6 (cM) Automated name-based View Maps
Cotton - GVc - 21 BNL1231 Marker 29 (cM) Automated name-based View Maps
E4M2_192 Marker 44.7 Cotton - HDC - 21 E4M2_192 Marker 136.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 E4M2_192 Marker 90.1 (cM) Automated name-based View Maps
Cotton - GVc - 21 E4M2_192 Marker 60.5 (cM) Automated name-based View Maps
BNL3649 Marker 51.6 Cotton - Guazuncho2xVH8-BC1 - A03 BNL3649 Marker 77.2 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL3649 Marker 136.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 BNL3649 Marker 92.6 (cM) Automated name-based View Maps
Cotton - CH - 21 BNL3649 Marker 120.9 (cM) Automated name-based View Maps
Cotton - TH - 21 BNL3649 Marker 63.5 (cM) Automated name-based View Maps
Cotton - GVc - 21 BNL3649 Marker 64.1 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL3649 Marker 160.2 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL3649 Marker 63.1 (cM) Automated name-based View Maps
E7M2_190 Marker 51.6 Cotton - GVc - 21 E7M2_190 Marker 64.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 E7M2_190 Marker 139.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 E7M2_190 Marker 92.6 (cM) Automated name-based View Maps
E7M2_152 Marker 51.6 No other positions
E3M2_198 Marker 57.2 Cotton - HDC - 21 E3M2_198 Marker 130.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 E3M2_198 Marker 106.2 (cM) Automated name-based View Maps
Cotton - GVc - 21 E3M2_198 Marker 70.7 (cM) Automated name-based View Maps
E2M1_94 Marker 57.2 No other positions
E7M5_160 Marker 57.2 No other positions
E2M5_350 Marker 57.2 Cotton - HDC - 21 E2M5_350 Marker 128.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 E2M5_350 Marker 106.2 (cM) Automated name-based View Maps
Cotton - GVc - 21 E2M5_350 Marker 71.2 (cM) Automated name-based View Maps
E7M4_177 Marker 58.9 No other positions
E2M7_120 Marker 60.3 Cotton - HDC - 21 E2M7_120 Marker 123.2 (cM) Automated name-based View Maps
Cotton - GVc - 21 E2M7_120 Marker 76.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 E2M7_120 Marker 112.2 (cM) Automated name-based View Maps
BNL2632 Marker 68 Cotton - Guazuncho2xVH8-BC1 - A03 BNL2632 Marker 104.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - A03 BNL2632 Marker 46.8 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU24 Marker 131.7 (cM) Automated name-based View Maps
Cotton - TH - 21 BNL2632 Marker 97 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 BNL2632 Marker 123 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL2632 Marker 109.2 (cM) Automated name-based View Maps
Cotton - GVc - 21 BNL2632 Marker 87.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 CLU24 Marker 117 (cM) Automated name-based View Maps
Cotton - TH - 11 BNL2632 Marker 78.4 (cM) Automated name-based View Maps
Cotton - CH - 11 BNL2632 Marker 118.7 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL2632 Marker 90.4 (cM) Automated name-based View Maps
E2M4_500 Marker 79.3 No other positions
E3M1_292 Marker 95.8 Cotton - HDC - 21 E3M1_292 Marker 108.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 E3M1_292 Marker 155 (cM) Automated name-based View Maps
Cotton - GVc - 21 E3M1_292 Marker 100.4 (cM) Automated name-based View Maps
BNL1681 Marker 100.7 Cotton - TH - 11 BNL1681 Marker 103.6 (cM) Automated name-based View Maps
Cotton - GVc - 21 BNL1681 Marker 119.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 BNL1681 Marker 162.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 BNL1681b Marker 85.62 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL1681 Marker 104.9 (cM) Automated name-based View Maps
Cotton - GVc - 21 BNL1681 Marker 104.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 BNL1681c Marker 101.68 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL1681 Marker 131.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - A03 BNL1681 Marker 85.3 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL1681 Marker 89.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL1681 Marker 143.2 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL1681 Marker 104.2 (cM) Automated name-based View Maps
BNL3171 Marker 128.5 Cotton - E3 - 21 BNL3171 Marker 182.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 BNL3171 Marker Cotton 8,205,715 - 8,206,217 (bp) Automated name-based View Maps
Cotton - GVc - 21 BNL3171 Marker 123.3 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL3171 Marker 85.6 (cM) Automated name-based View Maps
Cotton - T3 - 21 BNL3171 Marker 53.15 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 BNL3171 Marker 195.3 (cM) Automated name-based View Maps
Cotton - PK - D02 BNL3171 Marker 134.4 (cM) Automated name-based View Maps
Cotton - TH - 21 BNL3171 Marker 141.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 BNL3171 Marker 130.21 (cM) Automated name-based View Maps
Cotton - CH - 21 BNL3171 Marker 38.8 (cM) Automated name-based View Maps
E1M6_440 Marker 143.4 Cotton - GVc - 21 E1M6_440 Marker 133.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 E1M6_440 Marker 203.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 E1M6_440 Marker 78.3 (cM) Automated name-based View Maps