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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Guazuncho2xVH8-BC2
(Reference Set)
Min.
Correspondences
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Stack
Maps c1
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-BC2 [ View Map Set Info ]
Map Name: c1
Map Start: 0 cM
Map Stop: 132.7 cM
Features by Type:
16 Marker
16 Total

Map Features

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Items 1 to 16 of 16.
Cotton - Guazuncho2xVH8-BC2 - c1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL2440 Marker 0 Cotton - GVc - 1 BNL2440 Marker 7.1 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL2440 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c15 BNL2440 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL2440 Marker 6.9 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL2440 Marker 16.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 BNL2440 Marker Cotton 61,637,363 - 61,637,761 (bp) Automated name-based View Maps
Cotton - HDC - 15 BNL2440 Marker 32.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL2440 Marker 6.6 (cM) Automated name-based View Maps
Cotton - PK - c1 BNL2440 Marker 9.8 (cM) Automated name-based View Maps
Cotton - HDC - 1 BNL2440 Marker 26.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL2440 Marker 25.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 BNL2440b Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 BNL2440a Marker 3 (cM) Automated name-based View Maps
Cotton - TH - 15 BNL2440 Marker 123.4 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL2440 Marker 18 (cM) Automated name-based View Maps
E1M6_350 Marker 43.9 No other positions
E8M8_194 Marker 56.6 No other positions
E4M6_204 Marker 57.2 Cotton - HDC - 1 E4M6_204 Marker 59.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 E4M6_204 Marker 116.6 (cM) Automated name-based View Maps
Cotton - GVc - 1 E4M6_204 Marker 40.4 (cM) Automated name-based View Maps
E5M8_560 Marker 57.2 Cotton - GVc - 1 E5M8_560 Marker 32.5 (cM) Automated name-based View Maps
Cotton - HDC - 1 E5M8_560 Marker 52.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 E5M8_560 Marker 116.6 (cM) Automated name-based View Maps
E3M4_420 Marker 66.5 Cotton - Guazuncho2xVH8-BC1 - c1 E3M4_420 Marker 125.1 (cM) Automated name-based View Maps
Cotton - HDC - 1 E3M4_420 Marker 63.9 (cM) Automated name-based View Maps
Cotton - GVc - 1 E3M4_420 Marker 50.7 (cM) Automated name-based View Maps
E4M4_236 Marker 80.9 No other positions
E5M7_340 Marker 83.1 Cotton - Guazuncho2xVH8-BC1 - c1 E5M7_340 Marker 164.8 (cM) Automated name-based View Maps
Cotton - HDC - 1 E5M7_340 Marker 81.2 (cM) Automated name-based View Maps
Cotton - GVc - 1 E5M7_340 Marker 84.2 (cM) Automated name-based View Maps
BNL3090 Marker 86.1 Cotton - T3 - 1 BNL3090 Marker 47.64 (cM) Automated name-based View Maps
Cotton - PK - c15 BNL3090 Marker 89.5 (cM) Automated name-based View Maps
Cotton - TH - 15 BNL3090 Marker 54.7 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL3090 Marker 47.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 BNL3090a Marker 66.28 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL3090 Marker 115.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c15 BNL3090 Marker 69.9 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL3090 Marker 51.86 (cM) Automated name-based View Maps
Cotton - PK - c16 BNL3090 Marker 52.8 (cM) Automated name-based View Maps
Cotton - HDC - 15 BNL3090 Marker 87.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL3090 Marker 168.7 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL3090 Marker 79.4 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL3090 Marker 95.1 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL3090 Marker 111.6 (cM) Automated name-based View Maps
Cotton - HDC - 1 BNL3090 Marker 80.2 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL3090 Marker 63.6 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL3090 Marker 79.3 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL3090 Marker 105.5 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL3090 Marker 29.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 BNL3090b Marker 47.81 (cM) Automated name-based View Maps
Cotton - HDC - 15 BNL3090 Marker 90.8 (cM) Automated name-based View Maps
BNL3888 Marker 96.7 Cotton - Guazuncho2xVH8-BC1 - c1 BNL3888 Marker 185.5 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL3888 Marker 92.1 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL3888 Marker 62.1 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL3888 Marker 43.9 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL3888 Marker 60.7 (cM) Automated name-based View Maps
Cotton - T3 - 1 BNL3888 Marker 41.27 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL3888 Marker 93.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL3888 Marker 83.6 (cM) Automated name-based View Maps
Cotton - PK - c1 BNL3888 Marker 131.6 (cM) Automated name-based View Maps
Cotton - HDC - 1 BNL3888 Marker 89.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 BNL3888 Marker 76.29 (cM) Automated name-based View Maps
BNL3580 Marker 108.7 Cotton - Guazuncho2xVH8-BC1 - c1 BNL3580 Marker 196.3 (cM) Automated name-based View Maps
Cotton - T3 - 1 BNL3580 Marker 23.15 (cM) Automated name-based View Maps
Cotton - HDC - 1 CLU42 Marker 105.1 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL3580 Marker 49.1 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL3580 Marker 107 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL3580 Marker 52.2 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL3580 Marker 113.1 (cM) Automated name-based View Maps
E1M6_207 Marker 109.7 No other positions
E8M3_186 Marker 113.6 No other positions
E4M4_278 Marker 116.3 No other positions
E5M8_228 Marker 117.4 Cotton - Guazuncho2xVH8-BC1 - c1 E5M8_228 Marker 214.6 (cM) Automated name-based View Maps
Cotton - HDC - 1 E5M8_228 Marker 128 (cM) Automated name-based View Maps
Cotton - GVc - 1 E5M8_228 Marker 126.9 (cM) Automated name-based View Maps
E8M2_74 Marker 132.7 No other positions