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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set)
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Maps c1
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c1
Map Start: 0 cM
Map Stop: 97.91 cM
Features by Type:
23 Marker
23 Total

Map Features

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Items 1 to 23 of 23.
Cotton - Guazuncho2xVH8-RIL - c1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU0934c Marker 69.85 Cotton - TH - 5 NAU0934 Marker 195.4 (cM) Automated name-based View Maps
Cotton - GVc - 1 NAU0934 Marker 83 (cM) Automated name-based View Maps
Cotton - T3 - 5 NAU0934 Marker 191.24 (cM) Automated name-based View Maps
Cotton - T3 - 22 NAU0934 Marker 4.98 (cM) Automated name-based View Maps
BNL3888 Marker 76.29 Cotton - T3 - 1 BNL3888 Marker 41.27 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL3888 Marker 60.7 (cM) Automated name-based View Maps
Cotton - PK - c1 BNL3888 Marker 131.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL3888 Marker 185.5 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL3888 Marker 92.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c1 BNL3888 Marker 96.7 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL3888 Marker 43.9 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL3888 Marker 62.1 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL3888 Marker 93.6 (cM) Automated name-based View Maps
CIR114 Marker 82.11 Cotton - Graimondii_physical - Gr_Chr02 CIR114 Marker Cotton 8,053,263 - 8,053,746 (bp) Automated name-based View Maps
Cotton - T3 - 1 CIR114 Marker 25.7 (cM) Automated name-based View Maps
Cotton - GVc - 1 CIR114 Marker 104.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CIR114 Marker 196.3 (cM) Automated name-based View Maps
NAU2419b Marker 86.11 Cotton - TH - 1 NAU2419 Marker 43.3 (cM) Automated name-based View Maps
Cotton - GVc - 15 NAU2419 Marker 104.1 (cM) Automated name-based View Maps
Cotton - GVc - 1 NAU2419 Marker 100.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 NAU2419c Marker 61.88 (cM) Automated name-based View Maps
NAU2083 Marker 97.91 Cotton - T3 - 1 NAU2083 Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU2083 Marker 29.7 (cM) Automated name-based View Maps
Cotton - GVc - 1 NAU2083 Marker 114 (cM) Automated name-based View Maps
MUSB0958b Marker 56.75 Cotton - GVc - 13 MUSB0958 Marker 89.1 (cM) Automated name-based View Maps
Cotton - T3 - 9 MUSB0958 Marker 110.44 (cM) Automated name-based View Maps
Cotton - T3 - 10 MUSB0958 Marker 82.33 (cM) Automated name-based View Maps
Cotton - GVc - 8 MUSB0958 Marker 122.7 (cM) Automated name-based View Maps
Cotton - T3 - 16 MUSB0958 Marker 124.44 (cM) Automated name-based View Maps
Cotton - T3 - 2 MUSB0958 Marker 53.27 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 MUSB0958g Marker 46.62 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUSB0958d Marker 39.08 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 MUSB0958a Marker 37.63 (cM) Automated name-based View Maps
Cotton - GVc - 1 MUSB0958 Marker 70.8 (cM) Automated name-based View Maps
Cotton - T3 - 1 MUSB0958 Marker 60.66 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 MUSB0958e Marker 25.11 (cM) Automated name-based View Maps
Cotton - GVc - 9 MUSB0958 Marker 41.5 (cM) Automated name-based View Maps
Cotton - GVc - 2 MUSB0958 Marker 47.4 (cM) Automated name-based View Maps
MUSS422b Marker 56.96 Cotton - E3 - 15 MUSS422 Marker 74.6 (cM) Automated name-based View Maps
Cotton - T3 - 15 MUSS422 Marker 64.41 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 MUSS422a Marker 39.45 (cM) Automated name-based View Maps
Cotton - GVc - 15 MUSS422 Marker 68.9 (cM) Automated name-based View Maps
Cotton - GVc - 1 MUSS422 Marker 71 (cM) Automated name-based View Maps
Cotton - T3 - 1 MUSS422 Marker 62.27 (cM) Automated name-based View Maps
Cotton - E3 - 1 MUSS422 Marker 36.4 (cM) Automated name-based View Maps
E43M48-M157.1 Marker 58.12 No other positions
BNL2440b Marker 0 Cotton - GVc - 1 BNL2440 Marker 7.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 BNL2440a Marker 3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 BNL2440 Marker Cotton 61,637,363 - 61,637,761 (bp) Automated name-based View Maps
Cotton - CH - 15 BNL2440 Marker 18 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL2440 Marker 6.9 (cM) Automated name-based View Maps
Cotton - TH - 15 BNL2440 Marker 123.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c1 BNL2440 Marker 0 (cM) Automated name-based View Maps
Cotton - PK - c1 BNL2440 Marker 9.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL2440 Marker 25.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c15 BNL2440 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL2440 Marker 6.6 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL2440 Marker 16.7 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL2440 Marker 0 (cM) Automated name-based View Maps
MUSS161b Marker 3.78 Cotton - GVc - 1 MUSS161 Marker 1.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 MUSS161a Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 15 MUSS161 Marker 117.41 (cM) Automated name-based View Maps
Cotton - GVc - 15 MUSS161 Marker 4.1 (cM) Automated name-based View Maps
Cotton - T3 - 1 MUSS161 Marker 129.91 (cM) Automated name-based View Maps
CIR009a Marker 4.63 Cotton - GVc - 15 CIR009 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 1 CIR009 Marker 125.89 (cM) Automated name-based View Maps
Cotton - T3 - 15 CIR009 Marker 114.21 (cM) Automated name-based View Maps
Cotton - GVc - 1 CIR009 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CIR009 Marker 0 (cM) Automated name-based View Maps
CIR199a Marker 12.88 Cotton - Graimondii_physical - Gr_Chr02 CIR199 Marker Cotton 61,011,287 - 61,011,554 (bp) Automated name-based View Maps
Cotton - GVc - 1 CIR199 Marker 21.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CIR199 Marker 13.9 (cM) Automated name-based View Maps
Cotton - T3 - 1 CIR199 Marker 111.85 (cM) Automated name-based View Maps
BNL1693b Marker 21.91 Cotton - Guazuncho2xVH8-BC1 - c15 BNL1693 Marker 22.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL1693 Marker 45.2 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL1693 Marker 14.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 BNL1693a Marker 12.3 (cM) Automated name-based View Maps
Cotton - T3 - 1 BNL1693 Marker 101.15 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL1693 Marker 21.6 (cM) Automated name-based View Maps
NAU2474 Marker 24.83 Cotton - GVc - 1 NAU2474 Marker 17.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 NAU2474 Marker Cotton 59,155,451 - 59,156,002 (bp) Automated name-based View Maps
Cotton - T3 - 1 NAU2474 Marker 98.61 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU2474 Marker 89.6 (cM) Automated name-based View Maps
NAU5411 Marker 32.3 Cotton - GVc - 1 NAU5411 Marker 26.5 (cM) Automated name-based View Maps
Cotton - E3 - 1 NAU5411 Marker 78.3 (cM) Automated name-based View Maps
CIR055 Marker 46.78 Cotton - GVc - 1 CIR055 Marker 56.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CIR055 Marker 102.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 CIR055b Marker 30.17 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR055 Marker 91.7 (cM) Automated name-based View Maps
E43M53-M234.9 Marker 54.3 Cotton - GVc - 1 E43M53-M234.9 Marker 68.5 (cM) Automated name-based View Maps
E35M54-M350.2 Marker 55.5 No other positions
MGHES10b Marker 56.88 Cotton - T3 - 15 MGHES10 Marker 64.22 (cM) Automated name-based View Maps
Cotton - CH - 15 MGHES10 Marker 95 (cM) Automated name-based View Maps
Cotton - CH - 1 MGHES10 Marker 77.6 (cM) Automated name-based View Maps
Cotton - GVc - 15 MGHES10 Marker 69.1 (cM) Automated name-based View Maps
Cotton - E3 - 1 MGHES10 Marker 37.8 (cM) Automated name-based View Maps
Cotton - T3 - 1 MGHES10 Marker 62.85 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 MGHES10a Marker 39.66 (cM) Automated name-based View Maps
Cotton - GVc - 1 MGHES10 Marker 70.9 (cM) Automated name-based View Maps
E32M49-M73.6 Marker 57.71 No other positions
E43M49-M-512.1 Marker 60.07 No other positions
BNL1350a Marker 62.52 Cotton - T3 - 1 BNL1350 Marker 57.33 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL1350 Marker 154.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 BNL1350b Marker 42.84 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL1350 Marker 77.8 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL1350 Marker 58.61 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c15 BNL1350 Marker 62.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL1350 Marker 103.3 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL1350 Marker 27 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL1350 Marker 66.9 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL1350 Marker 70.4 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL1350 Marker 96.6 (cM) Automated name-based View Maps
BNL3090a Marker 66.28 Cotton - PK - c16 BNL3090 Marker 52.8 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL3090 Marker 95.1 (cM) Automated name-based View Maps
Cotton - TH - 15 BNL3090 Marker 54.7 (cM) Automated name-based View Maps
Cotton - T3 - 1 BNL3090 Marker 47.64 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL3090 Marker 29.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL3090 Marker 168.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c1 BNL3090 Marker 86.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 BNL3090b Marker 47.81 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL3090 Marker 51.86 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL3090 Marker 115.9 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL3090 Marker 63.6 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL3090 Marker 105.5 (cM) Automated name-based View Maps
Cotton - PK - c15 BNL3090 Marker 89.5 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL3090 Marker 79.3 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL3090 Marker 111.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c15 BNL3090 Marker 69.9 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL3090 Marker 79.4 (cM) Automated name-based View Maps