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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set)
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Correspondences
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Maps c26
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c26
Map Start: 0 cM
Map Stop: 75.5 cM
Features by Type:
22 Marker
22 Total

Map Features

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Items 1 to 22 of 22.
Cotton - Guazuncho2xVH8-RIL - c26
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU3896 Marker 0 Cotton - GVc - 26 NAU3896 Marker 2.9 (cM) Automated name-based View Maps
Cotton - TH - 26 NAU3896 Marker 125 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU3896 Marker Cotton 56,989,571 - 56,990,310 (bp) Automated name-based View Maps
Cotton - E3 - 26 NAU3896 Marker 89.1 (cM) Automated name-based View Maps
JESPR300b Marker 1.13 Cotton - GVc - 12 JESPR300 Marker 2.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 JESPR300a Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 12 JESPR300 Marker 120.31 (cM) Automated name-based View Maps
Cotton - T3 - 26 JESPR300 Marker 109.91 (cM) Automated name-based View Maps
Cotton - GVc - 26 JESPR300 Marker 1.5 (cM) Automated name-based View Maps
Cotton - TH - 26 JESPR300 Marker 123.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 JESPR300 Marker 5.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 JESPR300 Marker 0 (cM) Automated name-based View Maps
Cotton - E3 - 12 JESPR300 Marker 210 (cM) Automated name-based View Maps
Cotton - TH - 12 JESPR300 Marker 149.5 (cM) Automated name-based View Maps
E43M52-M274.4 Marker 8.13 Cotton - GVc - 26 E43M52-M274.4 Marker 12 (cM) Automated name-based View Maps
CIR272b Marker 8.95 Cotton - CH - 12 CIR272 Marker 16.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 CIR272 Marker Cotton 55,820,823 - 55,821,189 (bp) Automated name-based View Maps
Cotton - GVc - 12 CIR272 Marker 5.8 (cM) Automated name-based View Maps
Cotton - E3 - 26 CIR272 Marker 100 (cM) Automated name-based View Maps
Cotton - CH - 26 CIR272 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 CIR272 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 26 CIR272 Marker 11.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 CIR272 Marker 10.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 CIR272a Marker 1.72 (cM) Automated name-based View Maps
BNL3537 Marker 20.21 Cotton - Graimondii_physical - Gr_Chr08 BNL3537 Marker Cotton 52,796,481 - 52,796,742 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL3537b Marker 14.75 (cM) Automated name-based View Maps
Cotton - GVc - 26 BNL3537 Marker 30.7 (cM) Automated name-based View Maps
Cotton - T3 - 26 BNL3537 Marker 80.61 (cM) Automated name-based View Maps
Cotton - TH - 26 BNL3537 Marker 93.2 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL3537 Marker 47.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL3537 Marker 67.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c26 BNL3537 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL3537 Marker 103.65 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL3537 Marker 34.2 (cM) Automated name-based View Maps
E32M49-M463.1 Marker 22.14 No other positions
E43M52-M105.5 Marker 22.74 Cotton - GVc - 26 E43M52-M105.5 Marker 33.6 (cM) Automated name-based View Maps
E41M47-M315.4 Marker 32.2 No other positions
BNL3482a Marker 33.83 Cotton - TH - 26 BNL3482 Marker 74.3 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL3482 Marker 28 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL3482 Marker 74.4 (cM) Automated name-based View Maps
Cotton - GVc - 26 BNL3482 Marker 46.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL3482b Marker 9.44 (cM) Automated name-based View Maps
Cotton - PK - c20 BNL3482 Marker 22.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL3482 Marker 82.6 (cM) Automated name-based View Maps
E43M52-M239.1 Marker 34.8 Cotton - GVc - 26 E43M52-M239.1 Marker 47.5 (cM) Automated name-based View Maps
BNL0341 Marker 37.79 Cotton - E3 - 26 BNL0341 Marker 54 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c26 BNL341 Marker 20.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL0341 Marker Cotton 44,036,795 - 44,037,096 (bp) Automated name-based View Maps
Cotton - CH - 26 BNL0341 Marker 80.1 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL0341 Marker 31.3 (cM) Automated name-based View Maps
Cotton - PK - c26 BNL0341 Marker 77.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL341 Marker 89.1 (cM) Automated name-based View Maps
Cotton - T3 - 26 BNL0341 Marker 56.76 (cM) Automated name-based View Maps
Cotton - GVc - 26 BNL0341 Marker 51.3 (cM) Automated name-based View Maps
Cotton - TH - 26 BNL0341 Marker 68.3 (cM) Automated name-based View Maps
E35M50-M91.6 Marker 38.47 No other positions
MUCS064 Marker 39.64 Cotton - GVc - 26 MUCS064 Marker 53.3 (cM) Automated name-based View Maps
Cotton - E3 - 26 MUCS064 Marker 56.8 (cM) Automated name-based View Maps
Cotton - T3 - 26 MUCS064 Marker 52.85 (cM) Automated name-based View Maps
E43M49-M358.8 Marker 46.26 No other positions
E32M49-M209.2 Marker 51.77 No other positions
E31M48-M151.9 Marker 54.05 No other positions
MUSS303 Marker 54.62 Cotton - GVc - 26 MUSS303 Marker 79.5 (cM) Automated name-based View Maps
Cotton - T3 - 26 MUSS303 Marker 34.03 (cM) Automated name-based View Maps
Cotton - E3 - 26 MUSS303 Marker 28.8 (cM) Automated name-based View Maps
BNL3599a Marker 56.74 Cotton - CH - 26 BNL3599 Marker 129.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL3599 Marker 153.3 (cM) Automated name-based View Maps
Cotton - E3 - 12 BNL3599 Marker 57.8 (cM) Automated name-based View Maps
Cotton - GVc - 26 BNL3599 Marker 82.2 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL3599 Marker 110.1 (cM) Automated name-based View Maps
Cotton - TH - 12 BNL3599 Marker 56.6 (cM) Automated name-based View Maps
Cotton - T3 - 26 BNL3599 Marker 25.88 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL3599 Marker 46.61 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL3599 Marker 165.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL3599b Marker 62.34 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL3599 Marker 137 (cM) Automated name-based View Maps
pGH331b Marker 62.12 Cotton - Guazuncho2xVH8-BC1 - c25 pGH331 Marker 52.4 (cM) Automated name-based View Maps
Cotton - PK - c12 pGH331 Marker 182.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 pGH331 Marker Cotton 2,889,976 - 2,890,819 (bp) Automated name-based View Maps
Cotton - GVc - 26 pGH331 Marker 114.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 pGH331 Marker 163.7 (cM) Automated name-based View Maps
Cotton - GVc - 25 pGH331 Marker 45.3 (cM) Automated name-based View Maps
CIR170 Marker 75.5 Cotton - Guazuncho2xVH8-BC1 - c26 CIR170 Marker 191.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 CIR170 Marker Cotton 509,927 - 510,211 (bp) Automated name-based View Maps
Cotton - GVc - 26 CIR170 Marker 139.8 (cM) Automated name-based View Maps
E43M49-M319.1 Marker 52.12 No other positions
E35M48-M116.2 Marker 52.14 No other positions