CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c5
Map Start: 0 cM
Map Stop: 108.92 cM
Features by Type:
43 Marker
2 QTL
45 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 45.       of 2 | Next
Cotton - Guazuncho2xVH8-RIL - c5
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR224a Marker 0 Cotton - Guazuncho2xVH8-RIL - c19 CIR224b Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 19 CIR224 Marker 7.28 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR224 Marker 5.54 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 CIR224 Marker 17.3 (cM) Automated name-based View Maps
Cotton - GVc - 22 CIR224 Marker 43.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 CIR224 Marker 50.1 (cM) Automated name-based View Maps
Cotton - T3 - 22 CIR224 Marker 67.69 (cM) Automated name-based View Maps
Cotton - GVc - 19 CIR224 Marker 13.5 (cM) Automated name-based View Maps
Cotton - CH - 19 CIR224 Marker 131.7 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR224 Marker 22.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR224 Marker 22.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 CIR224 Marker Cotton 332,369 - 332,555 (bp) Automated name-based View Maps
Cotton - E3 - 5 CIR224 Marker 27.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 CIR224c Marker 39.49 (cM) Automated name-based View Maps
Gate3BG11 Marker 8.61 Cotton - PK - A03 Gate3BG11 Marker 145.9 (cM) Automated name-based View Maps
Cotton - PK - c5 Gate3BG11 Marker 17.8 (cM) Automated name-based View Maps
E31M61-M61.4 Marker 14.77 No other positions
BNL4071a Marker 17.65 Cotton - T3 - 5 BNL4071 Marker 43.34 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL4071 Marker 184.2 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL4071 Marker 69.3 (cM) Automated name-based View Maps
Cotton - T3 - 19 BNL4071 Marker 44.66 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL4071 Marker Cotton 7,131,232 - 7,131,564 (bp) Automated name-based View Maps
BNL3029a Marker 21.68 Cotton - GVc - 19 BNL3029 Marker 72.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL3029 Marker 91.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL3029 Marker 52.6 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL3029 Marker 69.8 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL3029 Marker 97.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL3029 Marker 97.3 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL3029 Marker 59.68 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL3029 Marker 127.8 (cM) Automated name-based View Maps
Cotton - T3 - 19 BNL3029 Marker 60.77 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL3029 Marker 21.1 (cM) Automated name-based View Maps
NAU2029 Marker 23.44 Cotton - GVc - 5 NAU2029 Marker 25.6 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU2029 Marker 87.2 (cM) Automated name-based View Maps
NAU1042a Marker 25.1 Cotton - Guazuncho2xVH8-BC1 - D08 NAU1042 Marker 92.5 (cM) Automated name-based View Maps
Cotton - T3 - 5 NAU1042 Marker 51.59 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 NAU1042b Marker 35.84 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU1042 Marker 68.3 (cM) Automated name-based View Maps
Cotton - TH - 19 NAU1042 Marker 69.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 NAU1042 Marker 115.2 (cM) Automated name-based View Maps
Cotton - CH - 19 NAU1042 Marker 129 (cM) Automated name-based View Maps
Cotton - T3 - 19 NAU1042 Marker 63.45 (cM) Automated name-based View Maps
Cotton - TH - 19 NAU1042 Marker 56.4 (cM) Automated name-based View Maps
Cotton - CH - 19 NAU1042 Marker 128.2 (cM) Automated name-based View Maps
Cotton - GVc - 19 NAU1042 Marker 75.6 (cM) Automated name-based View Maps
CIR062a Marker 30.57 Cotton - TH - 19 CIR062 Marker 91.6 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR062 Marker 35.5 (cM) Automated name-based View Maps
Cotton - GVc - 19 CIR062 Marker 97.7 (cM) Automated name-based View Maps
Cotton - TH - 5 CIR062 Marker 93.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR062 Marker 157 (cM) Automated name-based View Maps
Cotton - T3 - 19 CIR062 Marker 89.93 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 CIR062b Marker 37.94 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR062 Marker 77.05 (cM) Automated name-based View Maps
CIR034 Marker 35.64 Cotton - CH - 5 CIR034 Marker 118.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 CIR034 Marker Cotton 21,568,801 - 21,568,960 (bp) Automated name-based View Maps
Cotton - GVc - 5 CIR034 Marker 44 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR034 Marker 165.8 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR034 Marker 89.85 (cM) Automated name-based View Maps
BNL2448b Marker 37.63 Cotton - GVc - 19 BNL2448 Marker 102 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL2448 Marker 119.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL2448 Marker 118.5 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL2448 Marker 108.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL2448 Marker 80.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL2448 Marker 167.7 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL2448 Marker 156.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 BNL2448a Marker 43.02 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL2448 Marker 47.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL2448 Marker 60.5 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL2448 Marker 129.2 (cM) Automated name-based View Maps
E32M54-M245.0 Marker 39.97 No other positions
BNL1878a Marker 42.72 Cotton - GVc - 19 BNL1878 Marker 103 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL1878 Marker 112.7 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL1878 Marker 86.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL1878 Marker 82 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL1878 Marker 104.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL1878 Marker 64.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL1878 Marker 119.7 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL1878 Marker 148.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL1878 Marker 170.4 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL1878 Marker 51 (cM) Automated name-based View Maps
E36M47-M87.9 Marker 49.08 No other positions
BNL0542 Marker 50.68 Cotton - T3 - 5 BNL0542 Marker 101.65 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL542 Marker 75.8 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL0542 Marker 58.7 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL0542 Marker 105.3 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL0542 Marker 120.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL542 Marker 177.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL0542 Marker Cotton 24,289,365 - 24,289,705 (bp) Automated name-based View Maps
JESPR241 Marker 55.06 Cotton - GVc - 5 JESPR241 Marker 64.1 (cM) Automated name-based View Maps
Cotton - CH - 5 JESPR241 Marker 98.4 (cM) Automated name-based View Maps
Cotton - T3 - 5 JESPR241 Marker 105.25 (cM) Automated name-based View Maps
JESPR204c Marker 57.34 Cotton - T3 - 18 JESPR204 Marker 81.68 (cM) Automated name-based View Maps
Cotton - E3 - 19 JESPR204 Marker 167 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 JESPR204 Marker 185.2 (cM) Automated name-based View Maps
Cotton - T3 - 19 JESPR204 Marker 113 (cM) Automated name-based View Maps
Cotton - GVc - 5 JESPR204 Marker 65.9 (cM) Automated name-based View Maps
Cotton - TH - 13 JESPR204 Marker 31.3 (cM) Automated name-based View Maps
Cotton - TH - 19 JESPR204 Marker 116.6 (cM) Automated name-based View Maps
Cotton - GVc - 18 JESPR204 Marker 25.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 JESPR204 Marker 163.4 (cM) Automated name-based View Maps
Cotton - GVc - 19 JESPR204 Marker 124.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 JESPR204b Marker 15.74 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 JESPR204 Marker 28.5 (cM) Automated name-based View Maps
Cotton - CH - 18 JESPR204 Marker 43.6 (cM) Automated name-based View Maps
Cotton - TH - 18 JESPR204 Marker 38.3 (cM) Automated name-based View Maps
E43M49-M260.0 Marker 58.71 No other positions
E43M48-M68.3 Marker 59.23 No other positions
E31M48-M188.5 Marker 64.65 No other positions
NAU2001 Marker 73.69 Cotton - TH - 5 NAU2001 Marker 143.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU2001 Marker Cotton 32,543,763 - 32,544,381 (bp) Automated name-based View Maps
Cotton - GVc - 5 NAU2001 Marker 93.2 (cM) Automated name-based View Maps
E35M54-M195.4 Marker 75.34 No other positions
MUSB1035v Marker 76.27 Cotton - GVc - 5 MUSB1035 Marker 92.2 (cM) Automated name-based View Maps
Cotton - GVc - 14 MUSB1035 Marker 57.5 (cM) Automated name-based View Maps
Cotton - GVc - 19 MUSB1035 Marker 149.1 (cM) Automated name-based View Maps
Cotton - T3 - 5 MUSB1035 Marker 148.61 (cM) Automated name-based View Maps
Cotton - GVc - 12 MUSB1035 Marker 102.3 (cM) Automated name-based View Maps
Cotton - GVc - 25 MUSB1035 Marker 80.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 MUSB1035 Marker Cotton 32,261,219 - 32,262,407 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 MUSB1035s Marker 53.47 (cM) Automated name-based View Maps
Cotton - T3 - 5 MUSB1035 Marker 141.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 MUSB1035z Marker 44.25 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 MUSB1035t Marker 38.27 (cM) Automated name-based View Maps
Cotton - T3 - 11 MUSB1035 Marker 118.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 MUSB1035y Marker 55.43 (cM) Automated name-based View Maps
CIR294a Marker 77.23 Cotton - Guazuncho2xVH8-BC1 - c5 CIR294 Marker 254.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 CIR294 Marker 91.3 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR294 Marker 91.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 CIR294b Marker 53.68 (cM) Automated name-based View Maps
Cotton - GVc - 22 CIR294 Marker 61.3 (cM) Automated name-based View Maps
Cotton - TH - 5 CIR294 Marker 146.9 (cM) Automated name-based View Maps
Cotton - E3 - 5 CIR294 Marker 191.2 (cM) Automated name-based View Maps
Cotton - CH - 5 CIR294 Marker 75.8 (cM) Automated name-based View Maps
BNL3995 Marker 78.74 Cotton - TH - 5 BNL3995 Marker 151.3 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL3995 Marker 74.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL3995 Marker Cotton 15,134,435 - 15,134,833 (bp) Automated name-based View Maps
Cotton - GVc - 5 BNL3995 Marker 95.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL3995 Marker 258.5 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL3995 Marker 130.17 (cM) Automated name-based View Maps
E31M53-M88.3 Marker 79.75 Cotton - GVc - 5 E31M53-M88.3 Marker 96 (cM) Automated name-based View Maps