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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Sugarcane-R570AF_Rossi_2003
(Reference Set)
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Correspondences
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Maps I9
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sugarcane - R570AF_Rossi_2003 [ View Map Set Info ]
Map Name: I9
Map Start: 0 cM
Map Stop: 66.2 cM
Features by Type:
17 Marker
17 Total

Map Features

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Items 1 to 17 of 17.
Sugarcane - R570AF_Rossi_2003 - I9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
aagcat25 Marker 66.2 Sugarcane - R570AF_Hoarau_2001 - group2 aagcat25 Marker 32.6 (cM) Automated name-based View Maps
R313Ecod Marker 57.2 No other positions
R313Ecoa Marker 57.2 No other positions
R057Hind Marker 55 No other positions
R057Hine Marker 55 No other positions
aggcat9 Marker 46 Sugarcane - R570AF_Hoarau_2001 - group2 aggcat9 Marker 21.1 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group108 aggcat9 Marker 31 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group64 aggcat9 Marker 9.4 (cM) Automated name-based View Maps
mSSCIR13m1 Marker 39.4 Sugarcane - R570AF_Rossi_2003 - I6 mSSCIR13m2 Marker 44 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group187 mSSCIR13m3 Marker 7.4 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group44 mSSCIR13m4 Marker 60.3 (cM) Automated name-based View Maps
aaccac27 Marker 37.4 Sugarcane - R570_Raboin_2006 - group108 aaccac27 Marker 33.2 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group2 aaccac27 Marker 15.6 (cM) Automated name-based View Maps
aagcta29 Marker 36.4 Sugarcane - R570AF_Hoarau_2001 - group2 aagcta29 Marker 12.9 (cM) Automated name-based View Maps
accctc25 Marker 36.4 Sugarcane - R570AF_Hoarau_2001 - group2 accctc25 Marker 9.8 (cM) Automated name-based View Maps
actctg3 Marker 35.4 Sugarcane - R570_Raboin_2006 - group108 actctg3 Marker 28.9 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group2 actctg3 Marker 7.8 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group119 actctg3 Marker 35.9 (cM) Automated name-based View Maps
acccat23 Marker 34.4 Sugarcane - R570AF_Hoarau_2001 - group2 acccat23 Marker 6.7 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group108 acccat23 Marker 29.4 (cM) Automated name-based View Maps
acactc4 Marker 34.4 Sugarcane - R570AF_Hoarau_2001 - group2 acactc4 Marker 5.1 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group88 acactc4 Marker 4.5 (cM) Automated name-based View Maps
R125Sstb Marker 31.5 No other positions
agccat4 Marker 26.3 Sugarcane - R570_Raboin_2006 - group108 agccat4 Marker 20.1 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group92 agccat4 Marker 13.8 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group2 agccat4 Marker 0 (cM) Automated name-based View Maps
mSSCIR14m1 Marker 11.1 Sugarcane - R570AF_Rossi_2003 - Ib mSSCIR14m3 Marker 82.1 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group108 mSSCIR14m1 Marker 0 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group44 mSSCIR14m9 Marker 48.6 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group154 mSSCIR14m6 Marker 0 (cM) Automated name-based View Maps
aggcat4 Marker 0 Sugarcane - MQ7653_Raboin_2006 - group122 aggcat4 Marker 6.7 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group2 aggcat4 Marker 7 (cM) Automated name-based View Maps