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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 22
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Magnification
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 22
Map Start: 0 cM
Map Stop: 118.7 cM
Features by Type:
72 Marker
72 Total

Map Features

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Items 1 to 25 of 72.       of 3 | Next
Cotton - TH - 22
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
EM1OD32-130 Marker 41.8 Cotton - HDC - 22 EM1OD32-130 Marker 40.2 (cM) Automated name-based View Maps
NAU3508 Marker 44.5 Cotton - Graimondii_physical - Gr_Chr12 NAU3508 Marker Cotton 9,160,348 - 9,161,150 (bp) Automated name-based View Maps
Cotton - HDC - 22 NAU3508 Marker 41.5 (cM) Automated name-based View Maps
NAU2329 Marker 45.4 Cotton - HDC - 22 CLU3925 Marker 42 (cM) Automated name-based View Maps
BNL1047 Marker 48.4 Cotton - HDC - 25 CLU6 Marker 116 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL1047 Marker 47.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL1047 Marker 32.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU6 Marker 61 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1047 Marker 33.9 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1047 Marker 45.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU6 Marker 121.7 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1047 Marker 126.88 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1047 Marker 40.1 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1047 Marker 41.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1047 Marker 29.5 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL1047 Marker 39.3 (cM) Automated name-based View Maps
NAU6240 Marker 50 Cotton - HDC - 22 NAU6240 Marker 44.2 (cM) Automated name-based View Maps
NAU2945 Marker 51 Cotton - HDC - 22 NAU2945 Marker 47.8 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU2945 Marker 86.1 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU2945 Marker 44.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU2945 Marker Cotton 59,708,224 - 59,708,820 (bp) Automated name-based View Maps
Y12912 Marker 51.8 Cotton - HDC - 22 Y12912 Marker 45 (cM) Automated name-based View Maps
NAU3738 Marker 52.4 Cotton - HDC - 22 CLU4466 Marker 45.3 (cM) Automated name-based View Maps
JESPR184 Marker 52.7 Cotton - HDC - 22 JESPR184 Marker 45.5 (cM) Automated name-based View Maps
Cotton - HDC - 5 JESPR184 Marker 44.3 (cM) Automated name-based View Maps
Cotton - T3 - 22 JESPR184 Marker 53.42 (cM) Automated name-based View Maps
Cotton - TH - 5 JESPR184 Marker 153 (cM) Automated name-based View Maps
BNL2664 Marker 53.3 Cotton - TH - 15 BNL2664 Marker 27.7 (cM) Automated name-based View Maps
Cotton - HDC - 15 BNL2664 Marker 130.3 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL2664 Marker 46.5 (cM) Automated name-based View Maps
NAU2945 Marker 54 Cotton - Graimondii_physical - Gr_Chr09 NAU2945 Marker Cotton 59,708,224 - 59,708,820 (bp) Automated name-based View Maps
Cotton - HDC - 22 NAU2945 Marker 47.8 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU2945 Marker 86.1 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU2945 Marker 44.7 (cM) Automated name-based View Maps
NAU3633 Marker 54.4 Cotton - HDC - 22 CLU4431 Marker 48.5 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU3633 Marker 88.7 (cM) Automated name-based View Maps
NAU5046 Marker 54.7 Cotton - HDC - 22 NAU5046 Marker 49.1 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU5046 Marker 92.8 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU5046 Marker 190.6 (cM) Automated name-based View Maps
TME18-160 Marker 54.9 Cotton - HDC - 22 TME18-160 Marker 49.4 (cM) Automated name-based View Maps
BNL3401 Marker 55.3 Cotton - E3 - 19 BNL3401 Marker 158.9 (cM) Automated name-based View Maps
Cotton - HDC - 19 BNL3401 Marker 75.3 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL3401 Marker 50.1 (cM) Automated name-based View Maps
BNL4088 Marker 55.4 Cotton - HDC - 22 BNL4088 Marker 50.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL4088 Marker Cotton 54,201,279 - 54,201,809 (bp) Automated name-based View Maps
BNL0206 Marker 55.6 Cotton - E3 - 22 BNL0206 Marker 87.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL0206 Marker 50.7 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL0206 Marker 86.7 (cM) Automated name-based View Maps
NAU3514 Marker 55.7 Cotton - HDC - 22 NAU3514 Marker 50.9 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU3514 Marker 76.3 (cM) Automated name-based View Maps
MUCS271 Marker 56 Cotton - Graimondii_physical - Gr_Chr09 MUCS271 Marker Cotton 60,357,842 - 60,359,256 (bp) Automated name-based View Maps
Cotton - HDC - 22 MUCS271 Marker 51.4 (cM) Automated name-based View Maps
Y1022 Marker 56.1 Cotton - HDC - 22 Y1022 Marker 51.6 (cM) Automated name-based View Maps
NAU3942 Marker 56.3 Cotton - E3 - 22 NAU3942 Marker 86.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU3942 Marker Cotton 62,134,028 - 62,134,885 (bp) Automated name-based View Maps
Cotton - HDC - 22 NAU3942 Marker 51.9 (cM) Automated name-based View Maps
NAU3103 Marker 56.4 Cotton - E3 - 22 NAU3103 Marker 86.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU3103 Marker Cotton 54,356,907 - 54,357,657 (bp) Automated name-based View Maps
Cotton - HDC - 22 NAU3103 Marker 52.1 (cM) Automated name-based View Maps
NAU2955 Marker 56.4 Cotton - HDC - 22 CLU4186 Marker 52.1 (cM) Automated name-based View Maps
NAU3825 Marker 56.4 Cotton - TH - 4 NAU3825 Marker 54.5 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU3825 Marker 83.7 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU3825 Marker 81.8 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU1338 Marker 54.1 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU1338 Marker 53.4 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU1338 Marker 52.1 (cM) Automated name-based View Maps
NAU6166 Marker 56.4 Cotton - HDC - 22 NAU6166 Marker 52.1 (cM) Automated name-based View Maps