CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A01
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: A01
Map Start: 0 cM
Map Stop: 173.4 cM
Features by Type:
107 Marker
11 QTL
118 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 118.       of 5 | Next
Cotton - PK - A01
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Unig22D09 Marker 72 Cotton - HDC - 13 Unig22D09 Marker 84.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Unig22D09 Marker Cotton 44,175,480 - 44,176,130 (bp) Automated name-based View Maps
Unig23E07 Marker 105.5 Cotton - HDC - 13 Unig23E07 Marker 54.9 (cM) Automated name-based View Maps
Unig24B05 Marker 48.3 Cotton - HDC - 13 Unig24B05 Marker 101.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Unig24B05 Marker Cotton 21,303,499 - 21,304,171 (bp) Automated name-based View Maps
Unig25A05 Marker 32.8 Cotton - Graimondii_physical - Gr_Chr05 Unig25A05 Marker Cotton 56,543,307 - 56,543,979 (bp) Automated name-based View Maps
Cotton - HDC - 13 Unig25A05 Marker 109.2 (cM) Automated name-based View Maps
A1208 Marker 58.7 Cotton - HDC - 13 A1208 Marker 93.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 A1208 Marker Cotton 51,253,293 - 51,254,276 (bp) Automated name-based View Maps
Unig26B12 Marker 54.7 Cotton - Graimondii_physical - Gr_Chr10 Unig26B12 Marker Cotton 61,448,027 - 61,448,693 (bp) Automated name-based View Maps
Cotton - HDC - 13 Unig26B12 Marker 97 (cM) Automated name-based View Maps
A1520 Marker 35.6 Cotton - HDC - 13 A1520 Marker 107.7 (cM) Automated name-based View Maps
Cotton - PK - c18 A1520 Marker 11.3 (cM) Automated name-based View Maps
Cotton - HDC - 18 A1520 Marker 111.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 A1520 Marker Cotton 55,583,496 - 55,584,711 (bp) Automated name-based View Maps
W11 Marker 56.9 Cotton - PK - A02 W11 Marker 46.7 (cM) Automated name-based View Maps
Cotton - HDC - 8 W11 Marker 46.6 (cM) Automated name-based View Maps
Cotton - HDC - 13 W11 Marker 95.2 (cM) Automated name-based View Maps
A1713 Marker 88.3 Cotton - Graimondii_physical - Gr_Chr13 A1713 Marker Cotton 35,753,069 - 35,753,919 (bp) Automated name-based View Maps
Cotton - PK - c18 A1713 Marker 77.4 (cM) Automated name-based View Maps
Cotton - HDC - 13 A1713 Marker 71.1 (cM) Automated name-based View Maps
Cotton - HDC - 18 A1713 Marker 55.7 (cM) Automated name-based View Maps
BNL0285 Marker 51.5 Cotton - T3 - 19 BNL0285 Marker 56.07 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL0285 Marker 80.5 (cM) Automated name-based View Maps
Cotton - HDC - 19 BNL0285 Marker 127.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL0285 Marker Cotton 9,990,692 - 9,990,993 (bp) Automated name-based View Maps
Cotton - TH - 19 BNL0285 Marker 59.1 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL0285 Marker 146.6 (cM) Automated name-based View Maps
Cotton - PK - D08 BNL0285 Marker 86.4 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL0285 Marker 62.9 (cM) Automated name-based View Maps
BNL3479 Marker 88.3 Cotton - Graimondii_physical - Gr_Chr13 BNL3479 Marker Cotton 37,677,610 - 37,678,015 (bp) Automated name-based View Maps
Cotton - PK - c18 BNL3479 Marker 75.6 (cM) Automated name-based View Maps
Cotton - T3 - 18 BNL3479 Marker 49.17 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL3479 Marker 57.8 (cM) Automated name-based View Maps
Cotton - HDC - 13 BNL3479 Marker 71.1 (cM) Automated name-based View Maps
Cotton - E3 - 18 BNL3479 Marker 82 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL3479 Marker 76.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c18 BNL3479 Marker 50.7 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL3479 Marker 50.4 (cM) Automated name-based View Maps
Cotton - TH - 13 BNL3479 Marker 67.2 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL3479 Marker 66 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL3479 Marker 91.7 (cM) Automated name-based View Maps
Coau1J11 Marker 119.6 Cotton - Graimondii_physical - Gr_Chr07 Coau1J11 Marker Cotton 41,473,838 - 41,474,453 (bp) Automated name-based View Maps
Cotton - HDC - 13 Coau1J11 Marker 45.3 (cM) Automated name-based View Maps
Coau2A19 Marker 92.8 Cotton - Graimondii_physical - Gr_Chr04 Coau2A19 Marker Cotton 60,364,550 - 60,365,454 (bp) Automated name-based View Maps
Cotton - HDC - 13 Coau2A19 Marker 67.3 (cM) Automated name-based View Maps
Coau2C17 Marker 56 Cotton - HDC - 18 Coau2C17 Marker 88.3 (cM) Automated name-based View Maps
Cotton - PK - c18 Coau2C17 Marker 36.7 (cM) Automated name-based View Maps
Cotton - HDC - 13 Coau2C17 Marker 95.9 (cM) Automated name-based View Maps
Coau2K07 Marker 16.5 Cotton - PK - c18 Coau2K07 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 13 Coau2K07 Marker 113 (cM) Automated name-based View Maps
Cotton - HDC - 18 Coau2K07 Marker 121 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Coau2K07 Marker Cotton 58,089,840 - 58,090,485 (bp) Automated name-based View Maps
Coau2L11 Marker 35.6 Cotton - HDC - 18 Coau2L11 Marker 108.4 (cM) Automated name-based View Maps
Cotton - HDC - 13 Coau2L11 Marker 107.7 (cM) Automated name-based View Maps
Cotton - PK - c18 Coau2L11 Marker 15.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Coau2L11 Marker Cotton 55,705,220 - 55,705,893 (bp) Automated name-based View Maps
G1125 Marker 92.8 Cotton - Guazuncho2xVH8-BC1 - c18 G1125 Marker 99.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 G1125 Marker 133 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 G1125 Marker Cotton 30,038,008 - 30,038,995 (bp) Automated name-based View Maps
Cotton - GVc - 13 G1125 Marker 81.4 (cM) Automated name-based View Maps
Cotton - HDC - 18 G1125 Marker 52.4 (cM) Automated name-based View Maps
Cotton - GVc - 18 G1125 Marker 83.1 (cM) Automated name-based View Maps
Cotton - HDC - 13 G1125 Marker 67.3 (cM) Automated name-based View Maps
Cotton - PK - c18 G1125 Marker 81.7 (cM) Automated name-based View Maps
Gafb23B18 Marker 28.3 Cotton - Graimondii_physical - Gr_Chr13 Gafb23B18 Marker Cotton 57,532,991 - 57,533,625 (bp) Automated name-based View Maps
Cotton - HDC - 13 Gafb23B18 Marker 111.5 (cM) Automated name-based View Maps
Gate1AE07 Marker 56.9 Cotton - PK - A02 Gate1AE07 Marker 46.7 (cM) Automated name-based View Maps
Cotton - HDC - 8 Gate1AE07 Marker 46.6 (cM) Automated name-based View Maps
Cotton - HDC - 13 Gate1AE07 Marker 95.2 (cM) Automated name-based View Maps
Gate1AG05 Marker 72 Cotton - HDC - 18 Gate1AG05 Marker 67.9 (cM) Automated name-based View Maps
Cotton - HDC - 13 Gate1AG05 Marker 84.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gate1AG05 Marker Cotton 46,481,707 - 46,482,176 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 Gate1AG05 Marker 40.48 (cM) Automated name-based View Maps
Cotton - GVc - 18 Gate1AG05 Marker 53.2 (cM) Automated name-based View Maps
Gate1BG08 Marker 40.5 Cotton - HDC - 13 Gate1BG08 Marker 105.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gate1BG08 Marker Cotton 54,564,281 - 54,564,979 (bp) Automated name-based View Maps
Gate1CB09 Marker 167 Cotton - HDC - 13 Gate1CB09 Marker 13.5 (cM) Automated name-based View Maps
Gate1CF04 Marker 20.5 Cotton - HDC - 13 Gate1CF04 Marker 112.5 (cM) Automated name-based View Maps
Gate2BF11 Marker 0 Cotton - PK - c16 Gate2BF11 Marker 84.3 (cM) Automated name-based View Maps
Cotton - HDC - 16 Gate2BF11 Marker 77.3 (cM) Automated name-based View Maps
Cotton - HDC - 13 Gate2BF11 Marker 118.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Gate2BF11 Marker Cotton 22,071,630 - 22,072,008 (bp) Automated name-based View Maps
Gate2CB12 Marker 62.7 Cotton - PK - c17 Gate2CB12 Marker 82.4 (cM) Automated name-based View Maps
Cotton - HDC - 17 Gate2CB12 Marker 45.1 (cM) Automated name-based View Maps
Cotton - HDC - 13 Gate2CB12 Marker 91.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gate2CB12 Marker Cotton 28,907,494 - 28,908,241 (bp) Automated name-based View Maps