CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c15
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c15
Map Start: 0 cM
Map Stop: 176.4 cM
Features by Type:
96 Marker
13 QTL
109 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 109.       Previous | of 5 | Next
Cotton - PK - c15
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
P05_39 Marker 77.6 Cotton - HDC - 15 P05_39 Marker 83.9 (cM) Automated name-based View Maps
pAR019 Marker 46.7 Cotton - HDC - 15 pAR019 Marker 61.1 (cM) Automated name-based View Maps
Cotton - HDC - 1 pAR019 Marker 44.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pAR019 Marker Cotton 56,876,313 - 56,876,882 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 pAR019 Marker 86.7 (cM) Automated name-based View Maps
Cotton - GVc - 15 pAR019 Marker 39.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 pAR019 Marker 44.8 (cM) Automated name-based View Maps
Cotton - GVc - 1 pAR019 Marker 26.2 (cM) Automated name-based View Maps
pAR077 Marker 96.7 Cotton - Guazuncho2xVH8-BC1 - c15 pAR077 Marker 158.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 pAR077 Marker 215.7 (cM) Automated name-based View Maps
Cotton - GVc - 15 pAR077 Marker 117.3 (cM) Automated name-based View Maps
Cotton - HDC - 15 pAR077 Marker 126.5 (cM) Automated name-based View Maps
Cotton - GVc - 1 pAR077 Marker 128.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pAR077 Marker Cotton 2,995,621 - 2,996,647 (bp) Automated name-based View Maps
Cotton - HDC - 1 pAR077 Marker 129.4 (cM) Automated name-based View Maps
Cotton - PK - c1 pAR077 Marker 142.1 (cM) Automated name-based View Maps
PAR08C07 Marker 81.6 Cotton - PK - D02 PAR08C07 Marker 56.9 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU5488 Marker 86.2 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU5488 Marker 222.3 (cM) Automated name-based View Maps
Cotton - HDC - 1 CLU5488 Marker 68.1 (cM) Automated name-based View Maps
Cotton - PK - c1 PAR08C07 Marker 92.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 CLU5488 Marker 128.6 (cM) Automated name-based View Maps
PAR08E03 Marker 169.9 Cotton - HDC - 1 pAR08E03 Marker 64.8 (cM) Automated name-based View Maps
Cotton - PK - c1 PAR08E03 Marker 85.6 (cM) Automated name-based View Maps
Cotton - HDC - 15 pAR08E03 Marker 222.3 (cM) Automated name-based View Maps
PAR09B03 Marker 81.6 Cotton - HDC - 1 pAR09B03 Marker 68.1 (cM) Automated name-based View Maps
Cotton - PK - D02 PAR09B03 Marker 56.9 (cM) Automated name-based View Maps
Cotton - HDC - 21 pAR09B03 Marker 128.6 (cM) Automated name-based View Maps
Cotton - HDC - 15 pAR09B03 Marker 86.2 (cM) Automated name-based View Maps
Cotton - PK - c1 PAR09B03 Marker 92.1 (cM) Automated name-based View Maps
PAR1_14 Marker 0 Cotton - HDC - 15 pAR01_14 Marker 0 (cM) Automated name-based View Maps
pAR245 Marker 100 Cotton - HDC - 15 pAR245 Marker 130.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pAR245 Marker Cotton 3,237,341 - 3,237,525 (bp) Automated name-based View Maps
pAR475 Marker 46.7 Cotton - Graimondii_physical - Gr_Chr02 pAR475 Marker Cotton 56,702,586 - 56,703,689 (bp) Automated name-based View Maps
Cotton - HDC - 15 pAR475 Marker 61.1 (cM) Automated name-based View Maps
PAR775 Marker 59.1 Cotton - HDC - 15 pAR775 Marker 71.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pAR775 Marker Cotton 54,451,637 - 54,452,439 (bp) Automated name-based View Maps
pAR883 Marker 147.9 Cotton - PK - c1 pAR883 Marker 95.6 (cM) Automated name-based View Maps
Cotton - HDC - 15 pAR883 Marker 193.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pAR883 Marker Cotton 17,036,739 - 17,037,456 (bp) Automated name-based View Maps
Cotton - HDC - 1 pAR883 Marker 69.9 (cM) Automated name-based View Maps
pAR935 Marker 123.2 Cotton - HDC - 15 pAR935 Marker 161.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pAR935 Marker Cotton 1,390,547 - 1,390,955 (bp) Automated name-based View Maps
pAR957 Marker 59.1 Cotton - HDC - 15 pAR957 Marker 71.2 (cM) Automated name-based View Maps
Cotton - PK - c1 pAR957 Marker 73.2 (cM) Automated name-based View Maps
Cotton - HDC - 1 pAR957 Marker 58.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pAR957 Marker Cotton 53,575,244 - 53,576,035 (bp) Automated name-based View Maps
PBAM286 Marker 67.7 Cotton - Graimondii_physical - Gr_Chr02 PBAM286 Marker Cotton 37,710,410 - 37,711,020 (bp) Automated name-based View Maps
Cotton - HDC - 15 pBAM286 Marker 78.1 (cM) Automated name-based View Maps
pGH248 Marker 65.9 Cotton - PK - c2 pGH248 Marker 138.1 (cM) Automated name-based View Maps
Cotton - HDC - 15 pGH248 Marker 76.7 (cM) Automated name-based View Maps
Cotton - HDC - 2 pGH248 Marker 10.8 (cM) Automated name-based View Maps
pGH468 Marker 96.7 Cotton - HDC - 1 pGH468 Marker 93.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pGH468 Marker Cotton 4,603,511 - 4,603,975 (bp) Automated name-based View Maps
Cotton - PK - c1 pGH468 Marker 147.2 (cM) Automated name-based View Maps
Cotton - HDC - 15 pGH468 Marker 126.5 (cM) Automated name-based View Maps
pGH624 Marker 47.8 Cotton - HDC - 1 pGH624 Marker 53.9 (cM) Automated name-based View Maps
Cotton - HDC - 15 pGH624 Marker 62 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pGH624 Marker Cotton 56,517,974 - 56,518,546 (bp) Automated name-based View Maps
Cotton - PK - c1 pGH624 Marker 64.2 (cM) Automated name-based View Maps
pVNC094 Marker 72.2 Cotton - HDC - 15 pVNC094 Marker 80.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pVNC094 Marker Cotton 26,578,806 - 26,579,086 (bp) Automated name-based View Maps
PXP3_42 Marker 123.2 Cotton - HDC - 15 pXP3_42 Marker 161.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 PXP3_42 Marker Cotton 2,280,737 - 2,281,301 (bp) Automated name-based View Maps
Unig22C02 Marker 68.6 Cotton - HDC - 15 Unig22C02 Marker 78.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig22C02 Marker Cotton 38,685,398 - 38,685,559 (bp) Automated name-based View Maps
Unig24B11 Marker 78.5 Cotton - HDC - 15 Unig24B11 Marker 205.9 (cM) Automated name-based View Maps
Cotton - HDC - 15 Unig24B11 Marker 84.4 (cM) Automated name-based View Maps
Unig25A07 Marker 86.8 Cotton - HDC - 15 Unig25A07 Marker 89.2 (cM) Automated name-based View Maps
Unig25B08 Marker 123.2 Cotton - Graimondii_physical - Gr_Chr02 Unig25B08 Marker Cotton 2,325,639 - 2,326,278 (bp) Automated name-based View Maps
Cotton - PK - c1 Unig25B08 Marker 25.1 (cM) Automated name-based View Maps
Cotton - HDC - 1 Unig25B08 Marker 34.1 (cM) Automated name-based View Maps
Cotton - HDC - 15 Unig25B08 Marker 161.2 (cM) Automated name-based View Maps
Unig25D08 Marker 131 Cotton - HDC - 15 Unig25D08 Marker 171.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 Unig25D08 Marker Cotton 43,360,733 - 43,361,383 (bp) Automated name-based View Maps
Unig26F09 Marker 130.1 Cotton - Graimondii_physical - Gr_Chr02 Unig26F09 Marker Cotton 52,624,583 - 52,625,232 (bp) Automated name-based View Maps
Cotton - HDC - 15 Unig26F09 Marker 72.5 (cM) Automated name-based View Maps
Cotton - HDC - 15 Unig26F09 Marker 170.2 (cM) Automated name-based View Maps