CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Cotton-CH
Min.
Correspondences
Align Vertically
Stack
Maps c16 16
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c16
Map Start: 0 cM
Map Stop: 149.9 cM
Features by Type:
88 Marker
8 QTL
96 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 96.       Previous | of 4 | Next
Cotton - PK - c16
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
pAR295 Marker 87.8 Cotton - HDC - 16 pAR295 Marker 79.9 (cM) Automated name-based View Maps
pAR330 Marker 76.2 Cotton - HDC - 16 pAR330 Marker 69.9 (cM) Automated name-based View Maps
pAR402 Marker 58.1 Cotton - GVc - 7 pAR402 Marker 41.7 (cM) Automated name-based View Maps
Cotton - HDC - 16 pAR402 Marker 52.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR402 Marker Cotton 22,395,363 - 22,395,503 (bp) Automated name-based View Maps
Cotton - HDC - 7 pAR402 Marker 71 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 pAR402 Marker 92.1 (cM) Automated name-based View Maps
pAR544 Marker 24.8 Cotton - HDC - 16 pAR544 Marker 24 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 pAR544 Marker 56.5 (cM) Automated name-based View Maps
Cotton - GVc - 16 pAR544 Marker 24 (cM) Automated name-based View Maps
pAR579 Marker 58.1 Cotton - HDC - 16 pAR579 Marker 52.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR579 Marker Cotton 26,163,266 - 26,164,163 (bp) Automated name-based View Maps
pAR656 Marker 116.1 Cotton - HDC - 16 pAR656 Marker 101.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR656 Marker Cotton 4,216,327 - 4,217,394 (bp) Automated name-based View Maps
pAR714 Marker 40.2 Cotton - Graimondii_physical - Gr_Chr01 pAR714 Marker Cotton 45,759,659 - 45,759,927 (bp) Automated name-based View Maps
Cotton - HDC - 16 pAR714 Marker 37.2 (cM) Automated name-based View Maps
pAR763 Marker 140.5 Cotton - Graimondii_physical - Gr_Chr01 pAR763 Marker Cotton 910,537 - 910,753 (bp) Automated name-based View Maps
Cotton - HDC - 16 pAR763 Marker 120.8 (cM) Automated name-based View Maps
pAR844 Marker 24.8 Cotton - HDC - 16 pAR844 Marker 24 (cM) Automated name-based View Maps
pAR887 Marker 52.8 Cotton - HDC - 16 pAR887 Marker 47.9 (cM) Automated name-based View Maps
Cotton - PK - c7 pAR887 Marker 119.6 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR887 Marker 62.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR887 Marker Cotton 34,372,771 - 34,373,212 (bp) Automated name-based View Maps
pAR979 Marker 62.6 Cotton - Graimondii_physical - Gr_Chr01 pAR979 Marker Cotton 18,484,203 - 18,485,028 (bp) Automated name-based View Maps
Cotton - HDC - 16 pAR979 Marker 56.8 (cM) Automated name-based View Maps
Cotton - PK - c7 pAR979 Marker 133.8 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR979 Marker 76.5 (cM) Automated name-based View Maps
pGH267 Marker 62.6 Cotton - HDC - 16 pGH267 Marker 56.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pGH267 Marker Cotton 19,591,011 - 19,591,691 (bp) Automated name-based View Maps
pGH574 Marker 144 Cotton - Graimondii_physical - Gr_Chr01 pGH574 Marker Cotton 158,063 - 158,984 (bp) Automated name-based View Maps
Cotton - HDC - 16 pGH574 Marker 123.7 (cM) Automated name-based View Maps
PXP4_52 Marker 42.8 Cotton - HDC - 16 pXP4_52 Marker 39.4 (cM) Automated name-based View Maps
Unig23A09 Marker 52.8 Cotton - Graimondii_physical - Gr_Chr04 Unig23A09 Marker Cotton 5,836,796 - 5,837,452 (bp) Automated name-based View Maps
Cotton - HDC - 16 Unig23A09 Marker 47.9 (cM) Automated name-based View Maps
Unig24E11 Marker 142.8 Cotton - Graimondii_physical - Gr_Chr01 Unig24E11 Marker Cotton 1,380,582 - 1,381,207 (bp) Automated name-based View Maps
Cotton - PK - c25 Unig24E11 Marker 106 (cM) Automated name-based View Maps
Cotton - HDC - 25 Unig24E11 Marker 64.6 (cM) Automated name-based View Maps
Cotton - HDC - 16 Unig24E11 Marker 122.7 (cM) Automated name-based View Maps
Unig25G01 Marker 52.8 Cotton - HDC - 16 Unig25G01 Marker 47.9 (cM) Automated name-based View Maps
Cotton - PK - D02 Unig25G01 Marker 105.3 (cM) Automated name-based View Maps
Cotton - HDC - 21 Unig25G01 Marker 103.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Unig25G01 Marker Cotton 15,280,294 - 15,280,856 (bp) Automated name-based View Maps
Unig26G08 Marker 116.1 Cotton - Graimondii_physical - Gr_Chr02 Unig26G08 Marker Cotton 56,787,775 - 56,788,433 (bp) Automated name-based View Maps
Cotton - HDC - 16 Unig26G08 Marker 101.2 (cM) Automated name-based View Maps
Cotton - HDC - 15 Unig26G08 Marker 61.1 (cM) Automated name-based View Maps
Cotton - PK - c15 Unig26G08 Marker 46.7 (cM) Automated name-based View Maps
Unig28G08 Marker 58.1 Cotton - Graimondii_physical - Gr_Chr01 Unig28G08 Marker Cotton 22,589,966 - 22,590,614 (bp) Automated name-based View Maps
Cotton - HDC - 16 Unig28G08 Marker 52.4 (cM) Automated name-based View Maps
A1182 Marker 82.6 Cotton - HDC - 7 A1182 Marker 100.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 A1182 Marker 127.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 A1182 Marker 157.4 (cM) Automated name-based View Maps
Cotton - GVc - 7 A1182 Marker 72.8 (cM) Automated name-based View Maps
Cotton - HDC - 16 A1182 Marker 76 (cM) Automated name-based View Maps
Cotton - HDC - 3 A1182 Marker 101.3 (cM) Automated name-based View Maps
Cotton - GVc - 16 A1182 Marker 78.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 A1182 Marker Cotton 12,310,138 - 12,311,167 (bp) Automated name-based View Maps
Cotton - PK - c7 A1182 Marker 157.8 (cM) Automated name-based View Maps
Cotton - PK - c3 A1182 Marker 52.3 (cM) Automated name-based View Maps
A1437 Marker 59 Cotton - Graimondii_physical - Gr_Chr01 A1437 Marker Cotton 21,686,886 - 21,687,536 (bp) Automated name-based View Maps
Cotton - HDC - 16 A1437 Marker 53.3 (cM) Automated name-based View Maps
A1620 Marker 125.3 Cotton - HDC - 16 A1620 Marker 108.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 A1620 Marker Cotton 2,596,920 - 2,597,771 (bp) Automated name-based View Maps
BNL1694 Marker 58.1 Cotton - Guazuncho2xVH8-BC1 - c7 BNL1694 Marker 86.8 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1694 Marker 78.22 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL1694 Marker 94.7 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL1694 Marker 75.5 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL1694 Marker 16 (cM) Automated name-based View Maps
Cotton - TH - 7 BNL1694 Marker 69.3 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1694 Marker 64.5 (cM) Automated name-based View Maps
Cotton - GVc - 7 BNL1694 Marker 36.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL1694 Marker 52.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1694 Marker 67.8 (cM) Automated name-based View Maps
Cotton - T3 - 7 BNL1694 Marker 85.88 (cM) Automated name-based View Maps
BNL3090 Marker 52.8 Cotton - Guazuncho2xVH8-RIL - c15 BNL3090b Marker 47.81 (cM) Automated name-based View Maps
Cotton - TH - 15 BNL3090 Marker 54.7 (cM) Automated name-based View Maps
Cotton - HDC - 15 BNL3090 Marker 87.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL3090 Marker 168.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 BNL3090a Marker 66.28 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL3090 Marker 115.9 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL3090 Marker 51.86 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL3090 Marker 79.4 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL3090 Marker 79.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c1 BNL3090 Marker 86.1 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL3090 Marker 105.5 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL3090 Marker 63.6 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL3090 Marker 111.6 (cM) Automated name-based View Maps
Cotton - PK - c15 BNL3090 Marker 89.5 (cM) Automated name-based View Maps
Cotton - HDC - 15 BNL3090 Marker 90.8 (cM) Automated name-based View Maps
Cotton - HDC - 1 BNL3090 Marker 80.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c15 BNL3090 Marker 69.9 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL3090 Marker 29.8 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL3090 Marker 95.1 (cM) Automated name-based View Maps
Cotton - T3 - 1 BNL3090 Marker 47.64 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL3090 Marker 47.9 (cM) Automated name-based View Maps
CMS26 Marker 6.1 Cotton - Graimondii_physical - Gr_Chr09 CMS26 Marker Cotton 9,692,558 - 9,693,161 (bp) Automated name-based View Maps
Cotton - HDC - 16 CMS26 Marker 8.4 (cM) Automated name-based View Maps