CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c17
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c17
Map Start: 0 cM
Map Stop: 84 cM
Features by Type:
57 Marker
11 QTL
68 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 68.       of 3 | Next
Cotton - PK - c17
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL3408 Marker 55.3 Cotton - Guazuncho2xVH8-BC1 - c17 BNL3408 Marker 4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3408 Marker 6.4 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3408 Marker 110.2 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL3408 Marker 43.5 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3408 Marker 94.68 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3408 Marker 96.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL3408b Marker 0 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3408 Marker 27.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3408 Marker Cotton 42,143,440 - 42,143,677 (bp) Automated name-based View Maps
Cotton - T3 - 17 BNL3408 Marker 14.26 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL3408 Marker 4.2 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL3408 Marker 56 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3408 Marker 0.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL3408a Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Coau2C23 Marker 46.2 Cotton - HDC - 17 Coau2C23 Marker 83.1 (cM) Automated name-based View Maps
Coau2M03 Marker 7.9 Cotton - HDC - 17 Coau2M03 Marker 123 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 Coau2M03 Marker Cotton 44,628,120 - 44,628,817 (bp) Automated name-based View Maps
G1030 Marker 57 Cotton - Graimondii_physical - Gr_Chr03 G1030 Marker Cotton 7,802,178 - 7,802,434 (bp) Automated name-based View Maps
Cotton - HDC - 17 G1030 Marker 71.7 (cM) Automated name-based View Maps
G1226 Marker 46.2 Cotton - Graimondii_physical - Gr_Chr03 G1226 Marker Cotton 38,397,285 - 38,397,764 (bp) Automated name-based View Maps
Cotton - HDC - 17 G1226 Marker 83.1 (cM) Automated name-based View Maps
Gafb11P04 Marker 0.9 Cotton - HDC - 26 Gafb11P04 Marker 109.1 (cM) Automated name-based View Maps
Cotton - HDC - 17 Gafb11P04 Marker 130.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Gafb11P04 Marker Cotton 49,687,031 - 49,687,941 (bp) Automated name-based View Maps
Cotton - PK - c26 Gafb11P04 Marker 48.5 (cM) Automated name-based View Maps
Gate1BC01 Marker 66 Cotton - HDC - 1 Gate1BC01 Marker 25.6 (cM) Automated name-based View Maps
Cotton - HDC - 17 Gate1BC01 Marker 62.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 Gate1BC01 Marker Cotton 61,772,714 - 61,773,204 (bp) Automated name-based View Maps
Cotton - PK - c1 Gate1BC01 Marker 8.4 (cM) Automated name-based View Maps
Gate1CC10 Marker 48.9 Cotton - HDC - 17 Gate1CC10 Marker 80.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 Gate1CC10 Marker Cotton 4,886,187 - 4,887,033 (bp) Automated name-based View Maps
Gate3AG04 Marker 82.4 Cotton - Graimondii_physical - Gr_Chr03 Gate3AG04 Marker Cotton 43,683,806 - 43,684,520 (bp) Automated name-based View Maps
Cotton - HDC - 17 Gate3AG04 Marker 45.1 (cM) Automated name-based View Maps
Gate3CB03 Marker 47.1 Cotton - HDC - 17 Gate3CB03 Marker 82.1 (cM) Automated name-based View Maps
Gate4CB06 Marker 55.3 Cotton - HDC - 17 Gate4CB06 Marker 73.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 Gate4CB06 Marker Cotton 20,316,936 - 20,317,430 (bp) Automated name-based View Maps
M16_121 Marker 42.7 Cotton - HDC - 17 M16_121 Marker 86.7 (cM) Automated name-based View Maps
PAR01A04 Marker 66 Cotton - Graimondii_physical - Gr_Chr03 pAR01A04 Marker Cotton 4,905,036 - 4,905,749 (bp) Automated name-based View Maps
Cotton - HDC - 17 pAR01A04 Marker 62.3 (cM) Automated name-based View Maps
pAR076 Marker 66 Cotton - Graimondii_physical - Gr_Chr07 pAR076 Marker Cotton 27,382,134 - 27,383,183 (bp) Automated name-based View Maps
Cotton - HDC - 17 pAR076 Marker 62.3 (cM) Automated name-based View Maps
PAR1_56 Marker 0.9 Cotton - PK - c3 PAR1_56 Marker 3.7 (cM) Automated name-based View Maps
Cotton - HDC - 3 pAR01_56 Marker 137.4 (cM) Automated name-based View Maps
Cotton - HDC - 17 pAR01_56 Marker 130.3 (cM) Automated name-based View Maps
pAR185 Marker 44.5 Cotton - PK - c3 pAR185 Marker 52.2 (cM) Automated name-based View Maps
Cotton - HDC - 17 pAR185 Marker 84.8 (cM) Automated name-based View Maps
Cotton - HDC - 3 pAR185 Marker 101.4 (cM) Automated name-based View Maps
PAR3_20 Marker 42.7 Cotton - HDC - 17 pAR03_20 Marker 86.7 (cM) Automated name-based View Maps
pAR847 Marker 60 Cotton - HDC - 17 pAR847 Marker 68.5 (cM) Automated name-based View Maps
pGH395 Marker 55.3 Cotton - HDC - 17 pGH395 Marker 73.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pGH395 Marker Cotton 38,920,681 - 38,921,686 (bp) Automated name-based View Maps
pGH457 Marker 3.8 Cotton - HDC - 17 pGH457 Marker 127.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 pGH457 Marker Cotton 45,072,873 - 45,073,317 (bp) Automated name-based View Maps
pGH549 Marker 84 Cotton - HDC - 15 pGH549 Marker 61.1 (cM) Automated name-based View Maps
Cotton - HDC - 2 pGH549 Marker 64.4 (cM) Automated name-based View Maps
Cotton - PK - c15 pGH549 Marker 46.7 (cM) Automated name-based View Maps
Cotton - HDC - 17 pGH549 Marker 43.4 (cM) Automated name-based View Maps
Cotton - PK - c2 pGH549 Marker 87.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 pGH549 Marker Cotton 6,639,584 - 6,640,068 (bp) Automated name-based View Maps
pVNC059 Marker 43.6 Cotton - Graimondii_physical - Gr_Chr10 pVNC059 Marker Cotton 6,430,490 - 6,431,032 (bp) Automated name-based View Maps
Cotton - HDC - 17 pVNC059 Marker 85.7 (cM) Automated name-based View Maps
Unig24G02 Marker 55.3 Cotton - HDC - 2 Unig24G02 Marker 58.7 (cM) Automated name-based View Maps
Cotton - HDC - 17 Unig24G02 Marker 73.4 (cM) Automated name-based View Maps
Cotton - PK - c2 Unig24G02 Marker 93.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 Unig24G02 Marker Cotton 9,179,443 - 9,180,102 (bp) Automated name-based View Maps
Unig25D01 Marker 46.2 Cotton - Graimondii_physical - Gr_Chr03 Unig25D01 Marker Cotton 37,327,178 - 37,327,852 (bp) Automated name-based View Maps
Cotton - PK - c3 Unig25D01 Marker 57.1 (cM) Automated name-based View Maps
Cotton - HDC - 17 Unig25D01 Marker 83.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 Unig25D01 Marker 95.9 (cM) Automated name-based View Maps
A1436 Marker 74.1 Cotton - HDC - 17 A1436 Marker 53.8 (cM) Automated name-based View Maps
Cotton - HDC - 2 A1436 Marker 38.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 A1436 Marker Cotton 2,422,175 - 2,423,136 (bp) Automated name-based View Maps
Cotton - PK - c2 A1436 Marker 111.9 (cM) Automated name-based View Maps