CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c2
Map Start: 0 cM
Map Stop: 147.4 cM
Features by Type:
66 Marker
15 QTL
81 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 81.       Previous | of 4 | Next
Cotton - PK - c2
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gafb13B07 Marker 92.4 Cotton - PK - A02 Gafb13B07 Marker 109.1 (cM) Automated name-based View Maps
Cotton - HDC - 8 Gafb13B07 Marker 123.3 (cM) Automated name-based View Maps
Cotton - HDC - 2 Gafb13B07 Marker 60.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gafb13B07 Marker Cotton 25,056,352 - 25,057,042 (bp) Automated name-based View Maps
Gafb25M09 Marker 31.6 Cotton - HDC - 2 Gafb25M09 Marker 105.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Gafb25M09 Marker Cotton 2,223,267 - 2,224,159 (bp) Automated name-based View Maps
Gate1CB08 Marker 85.1 Cotton - Graimondii_physical - Gr_Chr05 Gate1CB08 Marker Cotton 15,767,340 - 15,767,976 (bp) Automated name-based View Maps
Cotton - HDC - 2 Gate1CB08 Marker 64.4 (cM) Automated name-based View Maps
Gate2AA09 Marker 18.3 Cotton - PK - c14 Gate2AA09 Marker 7.7 (cM) Automated name-based View Maps
Cotton - HDC - 14 Gate2AA09 Marker 127.3 (cM) Automated name-based View Maps
Cotton - HDC - 2 Gate2AA09 Marker 117.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Gate2AA09 Marker Cotton 1,052,608 - 1,053,057 (bp) Automated name-based View Maps
Gate3BF06 Marker 55.1 Cotton - HDC - 2 Gate3BF06 Marker 84.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 Gate3BF06 Marker 108.3 (cM) Automated name-based View Maps
Cotton - HDC - 14 Gate3BF06 Marker 104.1 (cM) Automated name-based View Maps
Cotton - PK - c14 Gate3BF06 Marker 32.9 (cM) Automated name-based View Maps
Cotton - PK - c14 Gate3BF06 Marker 38.1 (cM) Automated name-based View Maps
Gate4AB01 Marker 32.4 Cotton - Graimondii_physical - Gr_Chr05 Gate4AB01 Marker Cotton 1,957,406 - 1,958,203 (bp) Automated name-based View Maps
Cotton - HDC - 2 Gate4AB01 Marker 105.1 (cM) Automated name-based View Maps
Gate4AE09 Marker 85.1 Cotton - HDC - 2 Gate4AE09 Marker 64.4 (cM) Automated name-based View Maps
Gate4BE02 Marker 80.9 Cotton - HDC - 2 Gate4BE02 Marker 64.4 (cM) Automated name-based View Maps
Gate4CF02 Marker 80.5 Cotton - Graimondii_physical - Gr_Chr05 Gate4CF02 Marker Cotton 21,743,863 - 21,744,580 (bp) Automated name-based View Maps
Cotton - HDC - 2 Gate4CF02 Marker 64.4 (cM) Automated name-based View Maps
Gate4DE11 Marker 92.4 Cotton - Graimondii_physical - Gr_Chr03 Gate4DE11 Marker Cotton 10,672,513 - 10,672,988 (bp) Automated name-based View Maps
Cotton - HDC - 2 Gate4DE11 Marker 60.3 (cM) Automated name-based View Maps
P02_35 Marker 85.5 Cotton - HDC - 2 P02_35 Marker 64.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 P02_35 Marker 77.3 (cM) Automated name-based View Maps
Cotton - PK - c14 P02_35 Marker 68.4 (cM) Automated name-based View Maps
PAR01D05 Marker 6.3 Cotton - HDC - 2 pAR01D05 Marker 128.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 pAR01D05 Marker Cotton 92,287 - 92,959 (bp) Automated name-based View Maps
PAR07F02 Marker 65.9 Cotton - Graimondii_physical - Gr_Chr05 pAR07F02 Marker Cotton 7,599,599 - 7,599,855 (bp) Automated name-based View Maps
Cotton - PK - c14 PAR07F02 Marker 56.6 (cM) Automated name-based View Maps
Cotton - HDC - 2 pAR07F02 Marker 64.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 pAR07F02 Marker 88.3 (cM) Automated name-based View Maps
PAR1_54 Marker 138.1 Cotton - HDC - 2 pAR01_54 Marker 10.8 (cM) Automated name-based View Maps
pAR151 Marker 91.5 Cotton - Graimondii_physical - Gr_Chr05 pAR151 Marker Cotton 8,924,346 - 8,924,782 (bp) Automated name-based View Maps
Cotton - HDC - 2 pAR151 Marker 61.3 (cM) Automated name-based View Maps
pAR316 Marker 116.1 Cotton - HDC - 2 pAR316 Marker 34 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 pAR316 Marker Cotton 1,623,907 - 1,624,815 (bp) Automated name-based View Maps
BW02.1(BT) QTL 56 - 74.8 No other positions
DM02.1(RV) QTL 51.4 - 60.3 No other positions
FF02.1 QTL 59.2 - 103.8 No other positions
FL02.1(HVsl2.5,HVuhm,Lw) QTL 59.2 - 103.8 Cotton - PK - A03 FLA03.1(HVsl2.5,HVuhm,Lw) QTL 12.3 - 113.3 (cM) Automated name-based View Maps
Cotton - PK - c26 FL26.1(HVsl2.5,HVuhm,Lw) QTL 0 - 36.8 (cM) Automated name-based View Maps
Cotton - PK - c23 FL23.1(HVsl2.5,HVuhm,Lw) QTL 57.8 - 65.5 (cM) Automated name-based View Maps
Cotton - PK - c20 FL20.1(HVsl2.5,Lw) QTL 25.1 - 37.1 (cM) Automated name-based View Maps
Cotton - PK - D08 FLD08.1(HVsl2.5,HVuhm,Lw) QTL 40.3 - 52.1 (cM) Automated name-based View Maps
Cotton - PK - D08 FLD08.2(HVsl2.5,HVuhm,Lw) QTL 114 - 167.9 (cM) Automated name-based View Maps
Cotton - PK - D08 FFD08.1(HVsl2.5,HVuhm,Lw) QTL 21.4 - 40.3 (cM) Automated name-based View Maps
Cotton - PK - D03 FLD03.1(HVsl2.5,HVuhm,Lw) QTL 43.7 - 63 (cM) Automated name-based View Maps
Cotton - PK - c5 FL05.2(HVsl2.5,Lw) QTL 34.3 - 63.4 (cM) Automated name-based View Maps
FS02.1 QTL 86 - 93 No other positions
FU02.1(HVui) QTL 61.5 - 65.3 No other positions
MIC02.1 QTL 62.8 - 94 No other positions
W302.1 QTL 95.4 - 96.9 No other positions
BW02.2(BT) QTL 88.7 - 113.4 No other positions