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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
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Maps 10
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 10
Map Start: 0 cM
Map Stop: 185.7 cM
Features by Type:
77 Marker
77 Total

Map Features

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Items 1 to 25 of 77.       of 4 | Next
Cotton - E3 - 10
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
HAU1344 Marker 78.7 Cotton - HDC - 10 CLU1019 Marker 73.1 (cM) Automated name-based View Maps
NAU6153 Marker 78 Cotton - HDC - 10 NAU6153 Marker 75.1 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU6153 Marker 64.3 (cM) Automated name-based View Maps
NAU3873 Marker 77.6 Cotton - HDC - 20 NAU3873 Marker 78.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU3873 Marker Cotton 51,916,836 - 51,917,676 (bp) Automated name-based View Maps
Cotton - E3 - 20 NAU3873 Marker 87.8 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU3873 Marker 72.5 (cM) Automated name-based View Maps
NAU4928 Marker 75.6 Cotton - HDC - 20 CLU3400 Marker 78.6 (cM) Automated name-based View Maps
Cotton - E3 - 20 NAU4928 Marker 88.8 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU3400 Marker 71.4 (cM) Automated name-based View Maps
HAU1968 Marker 74.1 Cotton - HDC - 20 CLU1212 Marker 83.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU1212 Marker 74.8 (cM) Automated name-based View Maps
Cotton - E3 - 20 HAU1968 Marker 85.4 (cM) Automated name-based View Maps
NAU3665 Marker 70.9 Cotton - TH - 20 NAU3665 Marker 65 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU3665 Marker 79.3 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU3665 Marker 70.4 (cM) Automated name-based View Maps
Cotton - E3 - 20 NAU3665 Marker 79.1 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU3665 Marker 66.3 (cM) Automated name-based View Maps
HAU0230 Marker 70.5 Cotton - HDC - 20 HAU0230 Marker 72.9 (cM) Automated name-based View Maps
Cotton - HDC - 10 HAU0230 Marker 70 (cM) Automated name-based View Maps
Cotton - E3 - 20 HAU0230 Marker 78.2 (cM) Automated name-based View Maps
BNL3790 Marker 69.3 Cotton - HDC - 10 BNL3790 Marker 69 (cM) Automated name-based View Maps
Cotton - CH - 10 BNL3790 Marker 52.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3790 Marker Cotton 50,292,213 - 50,292,729 (bp) Automated name-based View Maps
NAU6215 Marker 69 Cotton - TH - 20 NAU6215 Marker 65.7 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU6215 Marker 78.8 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU6215 Marker 68.8 (cM) Automated name-based View Maps
NAU6515 Marker 68.4 Cotton - HDC - 10 NAU6515 Marker 72.7 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU6515 Marker 65.3 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU6515 Marker 79.5 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU6515 Marker 64.5 (cM) Automated name-based View Maps
NAU2869 Marker 64.6 Cotton - TH - 20 NAU2869 Marker 66.8 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU2869 Marker 68.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU2869 Marker 65.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU2869 Marker Cotton 49,752,380 - 49,753,299 (bp) Automated name-based View Maps
Cotton - HDC - 20 NAU2869 Marker 78.2 (cM) Automated name-based View Maps
Gh199 Marker 60.8 Cotton - Graimondii_physical - Gr_Chr11 Gh199 Marker Cotton 53,686,960 - 53,687,576 (bp) Automated name-based View Maps
Cotton - HDC - 10 Gh199 Marker 52.8 (cM) Automated name-based View Maps
Cotton - T3 - 10 Gh199 Marker 22.5 (cM) Automated name-based View Maps
BNL0511 Marker 56.8 Cotton - HDC - 10 BNL0511 Marker 49.7 (cM) Automated name-based View Maps
HAU2009 Marker 56.3 Cotton - Graimondii_physical - Gr_Chr11 HAU2009 Marker Cotton 17,304,176 - 17,304,774 (bp) Automated name-based View Maps
Cotton - HDC - 10 HAU2009 Marker 49.3 (cM) Automated name-based View Maps
HAU1936 Marker 55.8 Cotton - E3 - 25 HAU1936 Marker 93.9 (cM) Automated name-based View Maps
Cotton - HDC - 25 HAU1936 Marker 69.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 HAU1936 Marker Cotton 48,165,350 - 48,165,711 (bp) Automated name-based View Maps
Cotton - HDC - 10 HAU1936 Marker 49 (cM) Automated name-based View Maps
NAU2911 Marker 54.7 Cotton - TH - 10 NAU2911 Marker 80.4 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU2911 Marker 48.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU2911 Marker Cotton 54,396,640 - 54,397,264 (bp) Automated name-based View Maps
MUSS068 Marker 54.4 Cotton - HDC - 10 MUSS068 Marker 55 (cM) Automated name-based View Maps
Cotton - T3 - 10 MUSS068 Marker 33.55 (cM) Automated name-based View Maps
NAU2082 Marker 54.3 Cotton - HDC - 10 CLU1579 Marker 54 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU2082 Marker 77.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU3539 Marker 56 (cM) Automated name-based View Maps
NAU4008 Marker 53.1 Cotton - HDC - 10 CLU1579 Marker 54 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU4008 Marker 77.1 (cM) Automated name-based View Maps
HAU2500 Marker 52.4 Cotton - HDC - 10 CLU1579 Marker 54 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU3539 Marker 56 (cM) Automated name-based View Maps
NAU2991 Marker 49.8 Cotton - Graimondii_physical - Gr_Chr11 NAU2991 Marker Cotton 56,471,264 - 56,472,163 (bp) Automated name-based View Maps
Cotton - HDC - 20 NAU2991 Marker 55.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU2991 Marker 46.5 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU2991 Marker 83.7 (cM) Automated name-based View Maps
DPL0026 Marker 47.4 Cotton - E3 - 20 DPL0026 Marker 67.1 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU171 Marker 65.1 (cM) Automated name-based View Maps
Cotton - T3 - 20 DPL0026 Marker 84.15 (cM) Automated name-based View Maps
NAU3262 Marker 43.8 Cotton - Graimondii_physical - Gr_Chr11 NAU3262 Marker Cotton 56,837,954 - 56,838,612 (bp) Automated name-based View Maps
Cotton - HDC - 10 NAU3262 Marker 44.5 (cM) Automated name-based View Maps
CIR166 Marker 43.6 Cotton - Graimondii_physical - Gr_Chr11 CIR166 Marker Cotton 48,926,966 - 48,927,332 (bp) Automated name-based View Maps
Cotton - CH - 10 CIR166 Marker 75.7 (cM) Automated name-based View Maps
Cotton - TH - 10 CIR166 Marker 65.8 (cM) Automated name-based View Maps
Cotton - HDC - 10 CIR166 Marker 44.4 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR166 Marker 105.6 (cM) Automated name-based View Maps
Cotton - HDC - 20 CIR166 Marker 72.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR166 Marker 180.5 (cM) Automated name-based View Maps
Cotton - CH - 20 CIR166 Marker 41.6 (cM) Automated name-based View Maps
HAU0949 Marker 41.1 Cotton - HDC - 10 CLU804 Marker 43.6 (cM) Automated name-based View Maps