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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
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Stack
Maps 20
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Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 20
Map Start: 0 cM
Map Stop: 160.9 cM
Features by Type:
96 Marker
96 Total

Map Features

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Items 1 to 25 of 96.       of 4 | Next
Cotton - E3 - 20
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL3670 Marker 90.7 Cotton - HDC - 20 BNL3670 Marker 82.3 (cM) Automated name-based View Maps
NAU6365 Marker 90.2 Cotton - HDC - 20 NAU6365 Marker 82.4 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU6365 Marker 59.7 (cM) Automated name-based View Maps
CIR063 Marker 89.5 Cotton - T3 - 20 CIR063 Marker 66.73 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR063 Marker 151.3 (cM) Automated name-based View Maps
Cotton - CH - 20 CIR063 Marker 51.4 (cM) Automated name-based View Maps
Cotton - HDC - 20 CIR063 Marker 83.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 CIR063 Marker Cotton 30,331,542 - 30,331,809 (bp) Automated name-based View Maps
Cotton - GVc - 20 CIR063 Marker 80.5 (cM) Automated name-based View Maps
NAU4928 Marker 88.8 Cotton - HDC - 20 CLU3400 Marker 78.6 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU3400 Marker 71.4 (cM) Automated name-based View Maps
Cotton - E3 - 10 NAU4928 Marker 75.6 (cM) Automated name-based View Maps
NAU3873 Marker 87.8 Cotton - HDC - 20 NAU3873 Marker 78.2 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU3873 Marker 72.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU3873 Marker Cotton 51,916,836 - 51,917,676 (bp) Automated name-based View Maps
Cotton - E3 - 10 NAU3873 Marker 77.6 (cM) Automated name-based View Maps
TMB0317 Marker 87.6 Cotton - HDC - 20 TMB0317 Marker 78.1 (cM) Automated name-based View Maps
Cotton - T3 - 20 TMB0317 Marker 71.11 (cM) Automated name-based View Maps
HAU3385 Marker 87.5 Cotton - HDC - 20 HAU3385 Marker 78.1 (cM) Automated name-based View Maps
NAU6269 Marker 87 Cotton - TH - 25 NAU6269 Marker 73.2 (cM) Automated name-based View Maps
Cotton - E3 - 25 NAU6269 Marker 55.7 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU6269 Marker 80.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 NAU6269 Marker 104.2 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU6269 Marker 63.1 (cM) Automated name-based View Maps
HAU3156 Marker 86.5 Cotton - HDC - 20 HAU3156 Marker 77.9 (cM) Automated name-based View Maps
HAU1968 Marker 85.4 Cotton - HDC - 20 CLU1212 Marker 83.1 (cM) Automated name-based View Maps
Cotton - E3 - 10 HAU1968 Marker 74.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU1212 Marker 74.8 (cM) Automated name-based View Maps
NAU4881 Marker 84.8 Cotton - HDC - 20 NAU4881 Marker 40.7 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU4881 Marker 96.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU4881 Marker Cotton 48,924,106 - 48,924,971 (bp) Automated name-based View Maps
NAU3813 Marker 84 Cotton - TH - 20 NAU3813 Marker 92.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU2198 Marker 44.6 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU3813 Marker 64 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU2198 Marker 79.8 (cM) Automated name-based View Maps
HAU2508 Marker 83.4 Cotton - HDC - 20 CLU726 Marker 77.2 (cM) Automated name-based View Maps
DPL0225 Marker 82.6 Cotton - Graimondii_physical - Gr_Chr11 DPL0225 Marker Cotton 49,500,662 - 49,501,145 (bp) Automated name-based View Maps
Cotton - T3 - 20 DPL0225 Marker 72.05 (cM) Automated name-based View Maps
Cotton - HDC - 5 DPL0225 Marker 109.1 (cM) Automated name-based View Maps
Cotton - HDC - 20 DPL0225 Marker 77.1 (cM) Automated name-based View Maps
Cotton - E3 - 5 DPL0225 Marker 76.9 (cM) Automated name-based View Maps
HAU1532 Marker 82 Cotton - HDC - 20 CLU1089 Marker 76.9 (cM) Automated name-based View Maps
TMB0987 Marker 81.5 Cotton - Graimondii_physical - Gr_Chr10 TMB0987 Marker Cotton 36,498,169 - 36,498,903 (bp) Automated name-based View Maps
Cotton - HDC - 20 TMB0987 Marker 76.8 (cM) Automated name-based View Maps
NAU3404 Marker 80.9 Cotton - TH - 20 NAU3404 Marker 64.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU1225 Marker 79.4 (cM) Automated name-based View Maps
BNL0119 Marker 80.1 Cotton - HDC - 20 BNL0119 Marker 76.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL0119 Marker Cotton 50,619,343 - 50,619,691 (bp) Automated name-based View Maps
Cotton - T3 - 20 BNL0119 Marker 72.52 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL0119 Marker 124.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL119 Marker 206.4 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL0119 Marker 69.7 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL0119 Marker 35.5 (cM) Automated name-based View Maps
NAU3122 Marker 79.8 Cotton - HDC - 20 NAU3122 Marker 75.9 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU3122 Marker 70.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU3122 Marker Cotton 51,123,002 - 51,123,762 (bp) Automated name-based View Maps
Cotton - HDC - 10 NAU3122 Marker 62.5 (cM) Automated name-based View Maps
NAU6667 Marker 79.5 Cotton - HDC - 10 NAU6667 Marker 72.3 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU6667 Marker 65.8 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU6667 Marker 65.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU6667 Marker 78.8 (cM) Automated name-based View Maps
NAU3665 Marker 79.1 Cotton - HDC - 10 NAU3665 Marker 70.4 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU3665 Marker 65 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU3665 Marker 79.3 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU3665 Marker 66.3 (cM) Automated name-based View Maps
Cotton - E3 - 10 NAU3665 Marker 70.9 (cM) Automated name-based View Maps
HAU0230 Marker 78.2 Cotton - HDC - 10 HAU0230 Marker 70 (cM) Automated name-based View Maps
Cotton - E3 - 10 HAU0230 Marker 70.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 HAU0230 Marker 72.9 (cM) Automated name-based View Maps
BNL0169 Marker 77.1 Cotton - Guazuncho2xVH8-BC1 - c20 BNL169 Marker 191.5 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL0169 Marker 77.49 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL169 Marker 95.5 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL0169 Marker 108.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL0169 Marker Cotton 52,767,986 - 52,768,276 (bp) Automated name-based View Maps
Cotton - HDC - 20 BNL0169 Marker 70.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL0169 Marker 67.21 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL0169 Marker 71.8 (cM) Automated name-based View Maps
BNL4035 Marker 76.3 Cotton - HDC - 20 BNL4035 Marker 69.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL4035 Marker Cotton 12,053,304 - 12,053,883 (bp) Automated name-based View Maps
JESPR235 Marker 75.9 Cotton - HDC - 20 CLU156 Marker 69.1 (cM) Automated name-based View Maps
Cotton - GVc - 20 JESPR235 Marker 109.8 (cM) Automated name-based View Maps
Cotton - TH - 22 JESPR235 Marker 59.6 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU156 Marker 57.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 JESPR235a Marker 69.7 (cM) Automated name-based View Maps
Cotton - T3 - 20 JESPR235 Marker 81.17 (cM) Automated name-based View Maps
Cotton - CH - 20 JESPR235 Marker 21.6 (cM) Automated name-based View Maps