CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 22
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 22
Map Start: 0 cM
Map Stop: 167.4 cM
Features by Type:
78 Marker
78 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 78.       of 4 | Next
Cotton - E3 - 22
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
HAU3261 Marker 167.4 Cotton - Graimondii_physical - Gr_Chr12 HAU3261 Marker Cotton 508,032 - 508,159 (bp) Automated name-based View Maps
Cotton - HDC - 22 HAU3261 Marker 8.8 (cM) Automated name-based View Maps
HAU1115 Marker 152.6 Cotton - HDC - 22 CLU906 Marker 18.6 (cM) Automated name-based View Maps
NAU2120 Marker 140.8 Cotton - HDC - 22 CLU3821 Marker 26.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU3821 Marker 15 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU2120 Marker 14.6 (cM) Automated name-based View Maps
NAU4058 Marker 139.6 Cotton - HDC - 22 CLU4591 Marker 28 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU4591 Marker 15.3 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU4058 Marker 17.6 (cM) Automated name-based View Maps
NAU2795 Marker 138.8 Cotton - Graimondii_physical - Gr_Chr12 NAU2795 Marker Cotton 3,493,067 - 3,493,806 (bp) Automated name-based View Maps
Cotton - HDC - 22 NAU2795 Marker 27.1 (cM) Automated name-based View Maps
DPL0722 Marker 137.1 Cotton - HDC - 22 DPL0722 Marker 27.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 DPL0722 Marker Cotton 3,415,406 - 3,416,176 (bp) Automated name-based View Maps
Cotton - T3 - 22 DPL0722 Marker 14.06 (cM) Automated name-based View Maps
Gh641 Marker 126.7 Cotton - HDC - 1 Gh641 Marker 49.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gh641 Marker Cotton 4,934,153 - 4,934,955 (bp) Automated name-based View Maps
Cotton - T3 - 1 Gh641 Marker 78.15 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gh641 Marker 32 (cM) Automated name-based View Maps
BNL4030 Marker 124.9 Cotton - GVc - 22 BNL4030 Marker 81.5 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL4030 Marker 58.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL4030 Marker Cotton 5,740,007 - 5,740,438 (bp) Automated name-based View Maps
Cotton - T3 - 5 BNL4030 Marker 156.51 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL4030a Marker 66.94 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL4030 Marker 170.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4030 Marker 24.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL4030 Marker 109 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL4030 Marker 130.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL4030 Marker 25.9 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4030 Marker 77.5 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL4030 Marker 103.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL4030 Marker 79 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL4030b Marker 92.78 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL4030 Marker 114.3 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL4030 Marker 27.12 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL4030 Marker 11.7 (cM) Automated name-based View Maps
HAU1527 Marker 120.6 Cotton - HDC - 22 HAU1527 Marker 34.4 (cM) Automated name-based View Maps
Cotton - E3 - 14 HAU1527 Marker 35.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 HAU1527 Marker Cotton 5,373,667 - 5,374,372 (bp) Automated name-based View Maps
Cotton - HDC - 16 HAU1527 Marker 58.2 (cM) Automated name-based View Maps
Cotton - E3 - 16 HAU1527 Marker 94.8 (cM) Automated name-based View Maps
Cotton - HDC - 14 HAU1527 Marker 61.6 (cM) Automated name-based View Maps
HAU2691 Marker 116 Cotton - Graimondii_physical - Gr_Chr12 HAU2691 Marker Cotton 6,017,529 - 6,018,534 (bp) Automated name-based View Maps
Cotton - E3 - 5 HAU2691 Marker 161.9 (cM) Automated name-based View Maps
Cotton - HDC - 5 HAU2691 Marker 86.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 HAU2691 Marker 36.2 (cM) Automated name-based View Maps
BNL4092 Marker 114.9 Cotton - GVc - 22 BNL4092 Marker 79.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL4092 Marker Cotton 5,689,884 - 5,690,385 (bp) Automated name-based View Maps
Cotton - CH - 22 BNL4092 Marker 141 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL4092 Marker 65.95 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL4092 Marker 34 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4092 Marker 26.9 (cM) Automated name-based View Maps
BNL3945 Marker 114.1 Cotton - HDC - 22 BNL3945 Marker 37 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL3945 Marker Cotton 5,867,282 - 5,867,705 (bp) Automated name-based View Maps
NAU3539 Marker 110.7 Cotton - HDC - 22 CLU3925 Marker 42 (cM) Automated name-based View Maps
Gh591 Marker 108.3 Cotton - E3 - 25 Gh591 Marker 72.6 (cM) Automated name-based View Maps
Cotton - T3 - 22 Gh591 Marker 41.96 (cM) Automated name-based View Maps
Cotton - HDC - 25 Gh591 Marker 91.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Gh591 Marker Cotton 63,204,845 - 63,205,658 (bp) Automated name-based View Maps
Cotton - HDC - 22 Gh591 Marker 39.3 (cM) Automated name-based View Maps
NAU3591 Marker 106.2 Cotton - HDC - 22 CLU819 Marker 37.9 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU3591 Marker 36.9 (cM) Automated name-based View Maps
NAU6578 Marker 105.2 Cotton - TH - 22 NAU6578 Marker 57.6 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU6578 Marker 54.3 (cM) Automated name-based View Maps
Gh200 Marker 103.7 Cotton - T3 - 22 Gh200 Marker 30.06 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gh200 Marker Cotton 8,503,571 - 8,504,078 (bp) Automated name-based View Maps
Cotton - HDC - 22 Gh200 Marker 41.1 (cM) Automated name-based View Maps
Gh012 Marker 99.2 Cotton - HDC - 22 Gh012 Marker 46.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gh012 Marker Cotton 14,313,516 - 14,313,996 (bp) Automated name-based View Maps
Cotton - T3 - 22 Gh012 Marker 53.8 (cM) Automated name-based View Maps
NAU4062 Marker 96.8 Cotton - HDC - 22 NAU4062 Marker 43.9 (cM) Automated name-based View Maps
NAU5099 Marker 95.3 Cotton - E3 - 5 NAU5099 Marker 191.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU5099 Marker Cotton 13,642,837 - 13,643,784 (bp) Automated name-based View Maps
Cotton - TH - 22 NAU5099 Marker 58.2 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU5099 Marker 55.3 (cM) Automated name-based View Maps
NAU3824 Marker 93.7 Cotton - TH - 5 NAU3824 Marker 148.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 NAU3824 Marker 47.1 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU3824 Marker 57.9 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU3824 Marker 54.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU3824 Marker Cotton 13,357,795 - 13,358,379 (bp) Automated name-based View Maps
NAU5046 Marker 92.8 Cotton - HDC - 22 NAU5046 Marker 49.1 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU5046 Marker 54.7 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU5046 Marker 190.6 (cM) Automated name-based View Maps
NAU2302 Marker 91.8 Cotton - T3 - 22 NAU2302 Marker 53.1 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU2302 Marker 45.9 (cM) Automated name-based View Maps
NAU5180 Marker 90.5 Cotton - E3 - 4 NAU5180 Marker 87.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU1338 Marker 52.1 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU1338 Marker 53.4 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU1338 Marker 54.1 (cM) Automated name-based View Maps
NAU6237 Marker 89.8 Cotton - HDC - 22 NAU6237 Marker 53.9 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU6237 Marker 57.4 (cM) Automated name-based View Maps