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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-GVc
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Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
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Aggregate evidence types separately: No yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - GVc [ View Map Set Info ]
Map Name: 10
Map Start: 0 cM
Map Stop: 157.9 cM
Features by Type:
63 Marker
6 QTL
69 Total

Map Features

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Items 1 to 25 of 69.       of 3 | Next
Cotton - GVc - 10
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
QTLClust_FIN_10_5 QTL 73.2 - 80.9 No other positions
QTLClust_FIN_10_6 QTL 32.3 - 55.6 No other positions
QTLClust_FIN_10_3 QTL 98.4 - 102.5 No other positions
QTLClust_FIN_10_2 QTL 139.3 - 143.9 No other positions
QTLClust_FIN_10_4 QTL 86.3 - 89.9 No other positions
QTLClust_FIN_10_1 QTL 149.5 - 156.5 No other positions
E3M3_360 Marker 110.5 Cotton - Guazuncho2xVH8-BC1 - c10 E3M3_360 Marker 130 (cM) Automated name-based View Maps
Cotton - HDC - 10 E3M3_360 Marker 59.2 (cM) Automated name-based View Maps
NAU1182 Marker 112.2 Cotton - Guazuncho2xVH8-RIL - c10 NAU1182 Marker 43.77 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU3539 Marker 56 (cM) Automated name-based View Maps
Cotton - CH - 10 NAU1182 Marker 63.8 (cM) Automated name-based View Maps
Cotton - CH - 10 NAU1182 Marker 64 (cM) Automated name-based View Maps
Cotton - T3 - 10 NAU1182 Marker 36.85 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU1182 Marker 76.5 (cM) Automated name-based View Maps
BNL3563 Marker 112.4 Cotton - T3 - 10 BNL3563 Marker 45.48 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL3563 Marker 72.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL3563 Marker 130 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3563 Marker Cotton 51,975,551 - 51,976,086 (bp) Automated name-based View Maps
Cotton - CH - 10 BNL3563 Marker 58.9 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL3563 Marker 60 (cM) Automated name-based View Maps
E5M6_82 Marker 112.4 Cotton - HDC - 10 E5M6_82 Marker 58 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 E5M6_82 Marker 130 (cM) Automated name-based View Maps
BNL2960 Marker 114 Cotton - TH - 10 BNL2960 Marker 80 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL2960 Marker 134 (cM) Automated name-based View Maps
Cotton - PK - c10 BNL2960 Marker 130.9 (cM) Automated name-based View Maps
Cotton - CH - 10 BNL2960 Marker 61.5 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL2960 Marker 40.73 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL2960 Marker 57.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 BNL2960 Marker 41.59 (cM) Automated name-based View Maps
E3M5_470 Marker 115.9 Cotton - Guazuncho2xVH8-BC1 - c10 E3M5_470 Marker 134 (cM) Automated name-based View Maps
Cotton - HDC - 10 E3M5_470 Marker 53.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 E3M5_470 Marker 107 (cM) Automated name-based View Maps
MUSS096 Marker 116.9 Cotton - Graimondii_physical - Gr_Chr11 MUSS096 Marker Cotton 56,043,112 - 56,043,865 (bp) Automated name-based View Maps
Cotton - HDC - 10 MUSS096 Marker 51.4 (cM) Automated name-based View Maps
Cotton - E3 - 20 MUSS096 Marker 59 (cM) Automated name-based View Maps
Cotton - GVc - 20 MUSS096 Marker 116.6 (cM) Automated name-based View Maps
Cotton - T3 - 20 MUSS096 Marker 88.79 (cM) Automated name-based View Maps
Cotton - T3 - 10 MUSS096 Marker 17.91 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 MUSS096b Marker 46.6 (cM) Automated name-based View Maps
Cotton - HDC - 20 MUSS096 Marker 61.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 MUSS096a Marker 75.6 (cM) Automated name-based View Maps
BNL2691 Marker 131.7 Cotton - HDC - 25 CLU27 Marker 54.8 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL2691 Marker 37.05 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU27 Marker 36.6 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL2691 Marker 71 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL2691b Marker 32.98 (cM) Automated name-based View Maps
Cotton - HDC - 6 CLU27 Marker 78.5 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL2691 Marker 107 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL2691 Marker 26.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 BNL2691a Marker 61.91 (cM) Automated name-based View Maps
CIR305 Marker 134.1 Cotton - Guazuncho2xVH8-BC1 - c20 CIR305 Marker 134.1 (cM) Automated name-based View Maps
Cotton - HDC - 20 CIR305 Marker 90.2 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR305 Marker 81.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 CIR305b Marker 57.28 (cM) Automated name-based View Maps
Cotton - CH - 20 CIR305 Marker 59.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 CIR305a Marker 47.25 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 CIR305 Marker Cotton 58,501,383 - 58,501,606 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR305 Marker 168.2 (cM) Automated name-based View Maps
Cotton - HDC - 10 CIR305 Marker 34.2 (cM) Automated name-based View Maps
NAU1169 Marker 142.5 Cotton - Guazuncho2xVH8-RIL - c10 NAU1169 Marker 67.71 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU1169 Marker 38.4 (cM) Automated name-based View Maps
Cotton - CH - 10 NAU1169 Marker 120.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 NAU1169 Marker 181.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU1169 Marker Cotton 60,679,849 - 60,680,446 (bp) Automated name-based View Maps
Cotton - TH - 20 NAU1169 Marker 104.8 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU1169 Marker 25.8 (cM) Automated name-based View Maps
pVNC149 Marker 145.7 Cotton - Graimondii_physical - Gr_Chr04 pVNC149 Marker Cotton 5,812,790 - 5,813,076 (bp) Automated name-based View Maps
Cotton - GVc - 8 pVNC149 Marker 139.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 pVNC149 Marker 177.5 (cM) Automated name-based View Maps
Cotton - PK - c10 pVNC149 Marker 159.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 pVNC149 Marker 195.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 pVNC149 Marker 22.6 (cM) Automated name-based View Maps
Cotton - HDC - 8 pVNC149 Marker 116.1 (cM) Automated name-based View Maps
Cotton - PK - A02 pVNC149 Marker 90.7 (cM) Automated name-based View Maps
E8M8_66 Marker 157.9 Cotton - Guazuncho2xVH8-BC1 - c10 E8M8_66 Marker 193.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 E8M8_66 Marker 10.4 (cM) Automated name-based View Maps
E6M7_600 Marker 0 Cotton - HDC - 10 E6M7_600 Marker 141.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 E6M7_600 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 E6M7_600 Marker 0 (cM) Automated name-based View Maps
A1158 Marker 3 Cotton - HDC - 20 A1158 Marker 134.5 (cM) Automated name-based View Maps
Cotton - PK - c10 A1158 Marker 38.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 A1158 Marker 138.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 A1158 Marker 2.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 A1158 Marker Cotton 2,827,504 - 2,828,689 (bp) Automated name-based View Maps
Cotton - PK - c20 A1158 Marker 30.1 (cM) Automated name-based View Maps
A1163 Marker 9.4 Cotton - Graimondii_physical - Gr_Chr11 A1163 Marker Cotton 4,047,503 - 4,049,287 (bp) Automated name-based View Maps
Cotton - PK - c20 A1163 Marker 44 (cM) Automated name-based View Maps
Cotton - HDC - 10 A1163 Marker 132.3 (cM) Automated name-based View Maps
Cotton - HDC - 20 A1163 Marker 124.4 (cM) Automated name-based View Maps
Cotton - PK - c10 A1163 Marker 49.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 A1163 Marker 8.5 (cM) Automated name-based View Maps
pAR860 Marker 11.5 Cotton - Guazuncho2xVH8-BC1 - c10 pAR860 Marker 11.1 (cM) Automated name-based View Maps
Cotton - HDC - 19 pAR860 Marker 57.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 pAR860 Marker Cotton 4,440,741 - 4,441,304 (bp) Automated name-based View Maps
Cotton - PK - D08 pAR860 Marker 183.2 (cM) Automated name-based View Maps
Cotton - HDC - 10 pAR860 Marker 130.2 (cM) Automated name-based View Maps
CIR372 Marker 12.6 Cotton - T3 - 10 CIR372 Marker 97.83 (cM) Automated name-based View Maps
Cotton - HDC - 10 CIR372 Marker 129.1 (cM) Automated name-based View Maps
Cotton - T3 - 9 CIR372 Marker 118.87 (cM) Automated name-based View Maps
Cotton - HDC - 9 CIR372 Marker 38.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR372 Marker 11.1 (cM) Automated name-based View Maps
BNL0256 Marker 20.3 Cotton - HDC - 10 BNL0256 Marker 122 (cM) Automated name-based View Maps
Cotton - PK - c10 BNL0256 Marker 57.4 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL0256 Marker 124.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL256 Marker 20.6 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL0256 Marker 92.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 BNL256 Marker 18.1 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL0256 Marker 43.7 (cM) Automated name-based View Maps
Cotton - CH - 10 BNL0256 Marker 10.5 (cM) Automated name-based View Maps
E5M3_108 Marker 22.4 Cotton - HDC - 10 E5M3_108 Marker 120.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 E5M3_108 Marker 22 (cM) Automated name-based View Maps