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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-GVc
(Reference Set)
Min.
Correspondences
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Maps 2
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - GVc [ View Map Set Info ]
Map Name: 2
Map Start: 0 cM
Map Stop: 107.9 cM
Features by Type:
76 Marker
5 QTL
81 Total

Map Features

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Items 1 to 25 of 81.       of 4 | Next
Cotton - GVc - 2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
QTLClust_FIN_2_1 QTL 84 - 86.5 No other positions
QTLClust_ELO_2_1 QTL 61.2 - 62.2 No other positions
QTLClust_FIN_2_2 QTL 71 - 73.4 No other positions
QTLClust_FIN_2_4 QTL 21 - 33.9 No other positions
QTLClust_FIN_2_3 QTL 63.8 - 65.6 No other positions
E43M2-M249.3 Marker 44.8 Cotton - HDC - 2 E43M2-M249.3 Marker 64.8 (cM) Automated name-based View Maps
BNL3971 Marker 45.5 Cotton - E3 - 2 BNL3971 Marker 78.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL3971 Marker 84.3 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL3971 Marker 64.4 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3971 Marker 53.1 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL3971 Marker 48.1 (cM) Automated name-based View Maps
Cotton - PK - c2 BNL3971 Marker 88.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 BNL3971 Marker 36.49 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL3971 Marker 59.5 (cM) Automated name-based View Maps
E1M2-M111.9 Marker 46.2 Cotton - HDC - 2 E1M2-M111.9 Marker 63.3 (cM) Automated name-based View Maps
E7M2_96 Marker 46.3 Cotton - Guazuncho2xVH8-BC1 - c2 E7M2_96 Marker 85.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 E7M2_96 Marker 62.8 (cM) Automated name-based View Maps
E41M1-M17.1 Marker 46.4 Cotton - HDC - 2 E41M1-M17.1 Marker 62.3 (cM) Automated name-based View Maps
MUSB0749 Marker 46.8 Cotton - HDC - 2 MUSB0749 Marker 61.5 (cM) Automated name-based View Maps
Cotton - T3 - 2 MUSB0749 Marker 49.82 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 MUSB0749 Marker Cotton 52,041,922 - 52,043,121 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUSB0749 Marker 39.13 (cM) Automated name-based View Maps
E43M54-M90.8 Marker 46.9 Cotton - Guazuncho2xVH8-RIL - c2 E43M54-M90.8 Marker 38.74 (cM) Automated name-based View Maps
Cotton - HDC - 2 E43M54-M90.8 Marker 61 (cM) Automated name-based View Maps
E1M2-M109.4 Marker 47 Cotton - HDC - 2 E1M2-M109.4 Marker 60.4 (cM) Automated name-based View Maps
E3M2_208 Marker 47.2 Cotton - Guazuncho2xVH8-BC1 - c2 E3M2_208 Marker 95.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 E3M2_208 Marker 56.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 E3M2_208 Marker 38.6 (cM) Automated name-based View Maps
MUSB0958 Marker 47.4 Cotton - HDC - 10 MUSB0958 Marker 107.4 (cM) Automated name-based View Maps
Cotton - HDC - 1 MUSB0958 Marker 73 (cM) Automated name-based View Maps
Cotton - HDC - 8 MUSB0958 Marker 108.6 (cM) Automated name-based View Maps
Cotton - HDC - 13 MUSB0958 Marker 63.1 (cM) Automated name-based View Maps
Cotton - T3 - 10 MUSB0958 Marker 82.33 (cM) Automated name-based View Maps
Cotton - GVc - 8 MUSB0958 Marker 122.7 (cM) Automated name-based View Maps
Cotton - GVc - 1 MUSB0958 Marker 70.8 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUSB0958 Marker 58.8 (cM) Automated name-based View Maps
Cotton - GVc - 9 MUSB0958 Marker 41.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 MUSB0958a Marker 37.63 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 MUSB0958e Marker 25.11 (cM) Automated name-based View Maps
Cotton - HDC - 9 MUSB0958 Marker 46.8 (cM) Automated name-based View Maps
Cotton - T3 - 9 MUSB0958 Marker 110.44 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 MUSB0958b Marker 56.75 (cM) Automated name-based View Maps
Cotton - T3 - 2 MUSB0958 Marker 53.27 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 MUSB0958g Marker 46.62 (cM) Automated name-based View Maps
Cotton - GVc - 13 MUSB0958 Marker 89.1 (cM) Automated name-based View Maps
Cotton - T3 - 16 MUSB0958 Marker 124.44 (cM) Automated name-based View Maps
Cotton - HDC - 16 MUSB0958 Marker 3.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUSB0958d Marker 39.08 (cM) Automated name-based View Maps
Cotton - T3 - 1 MUSB0958 Marker 60.66 (cM) Automated name-based View Maps
MUSB0399 Marker 47.4 Cotton - HDC - 13 MUSB0399 Marker 67.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUSB0399 Marker 59.6 (cM) Automated name-based View Maps
Cotton - GVc - 13 MUSB0399 Marker 83.3 (cM) Automated name-based View Maps
Cotton - T3 - 6 MUSB0399 Marker 33.08 (cM) Automated name-based View Maps
Cotton - HDC - 6 MUSB0399 Marker 66.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 MUSB0399b Marker 31.51 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUSB0399a Marker 39.09 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 MUSB0399 Marker Cotton 42,094,454 - 42,095,526 (bp) Automated name-based View Maps
E2M6_420 Marker 47.4 Cotton - HDC - 2 E2M6_420 Marker 59.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 E2M6_420 Marker 95.2 (cM) Automated name-based View Maps
MUSB1178 Marker 47.7 Cotton - HDC - 2 MUSB1178 Marker 59.3 (cM) Automated name-based View Maps
Cotton - T3 - 2 MUSB1178 Marker 53.92 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUSB1178a Marker 38.45 (cM) Automated name-based View Maps
E5M7_440 Marker 48.2 Cotton - Guazuncho2xVH8-BC2 - c2 E5M7_440 Marker 37.1 (cM) Automated name-based View Maps
Cotton - HDC - 2 E5M7_440 Marker 58.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 E5M7_440 Marker 81.3 (cM) Automated name-based View Maps
E31M2-M270.5 Marker 48.6 Cotton - HDC - 2 E31M2-M270.5 Marker 58.1 (cM) Automated name-based View Maps
NAU3875 Marker 48.9 Cotton - E3 - 2 NAU3875 Marker 80.1 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU3875 Marker 57.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 NAU3875 Marker Cotton 21,039,571 - 21,040,316 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 NAU3875 Marker 40.7 (cM) Automated name-based View Maps
Cotton - TH - 2 NAU3875 Marker 51.6 (cM) Automated name-based View Maps
Cotton - HDC - 17 NAU3875 Marker 89.6 (cM) Automated name-based View Maps
Cotton - TH - 17 NAU3875 Marker 42.3 (cM) Automated name-based View Maps
E2M6_224 Marker 49 Cotton - Guazuncho2xVH8-BC1 - c2 E2M6_224 Marker 86.5 (cM) Automated name-based View Maps
Cotton - HDC - 2 E2M6_224 Marker 57.8 (cM) Automated name-based View Maps
E2M6_500 Marker 50 Cotton - Guazuncho2xVH8-BC1 - c2 E2M6_500 Marker 95.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 E2M6_500 Marker 56.8 (cM) Automated name-based View Maps
E3M2_208 Marker 50.5 Cotton - Guazuncho2xVH8-BC1 - c2 E3M2_208 Marker 95.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 E3M2_208 Marker 38.6 (cM) Automated name-based View Maps
Cotton - HDC - 2 E3M2_208 Marker 56.4 (cM) Automated name-based View Maps
E5M8_460 Marker 50.6 Cotton - HDC - 2 E5M8_460 Marker 56.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 E5M8_460 Marker 95.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 E5M8_460 Marker 38.6 (cM) Automated name-based View Maps