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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-TH
(Reference Set)
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Correspondences
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Maps 4
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 4
Map Start: 0 cM
Map Stop: 126.1 cM
Features by Type:
44 Marker
44 Total

Map Features

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Items 1 to 25 of 44.       of 2 | Next
Cotton - TH - 4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Y1315-590 Marker 90.6 Cotton - HDC - 4 Y1315-590 Marker 77.1 (cM) Automated name-based View Maps
BNL2572 Marker 95.2 Cotton - GVc - 4 BNL2572 Marker 12.1 (cM) Automated name-based View Maps
Cotton - T3 - 4 BNL2572 Marker 82.71 (cM) Automated name-based View Maps
Cotton - CH - 4 BNL2572 Marker 32.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL2572 Marker Cotton 32,796,523 - 32,796,809 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c4 BNL2572 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 4 BNL2572 Marker 81.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 BNL2572 Marker 8.87 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL2572 Marker 52.5 (cM) Automated name-based View Maps
CIR122 Marker 98 Cotton - Guazuncho2xVH8-BC1 - c4 CIR122 Marker 52.5 (cM) Automated name-based View Maps
Cotton - GVc - 4 CIR122 Marker 15 (cM) Automated name-based View Maps
Cotton - HDC - 4 CIR122 Marker 79.4 (cM) Automated name-based View Maps
Cotton - E3 - 4 CIR122 Marker 16.2 (cM) Automated name-based View Maps
Cotton - HDC - 22 CIR122 Marker 88.6 (cM) Automated name-based View Maps
Cotton - GVc - 22 CIR122 Marker 13 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 CIR122 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 21 CIR122 Marker 127.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 CIR122b Marker 12.76 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 CIR122a Marker 16.29 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 CIR122 Marker Cotton 32,909,187 - 32,909,567 (bp) Automated name-based View Maps
Cotton - CH - 4 CIR122 Marker 29.2 (cM) Automated name-based View Maps
Cotton - CH - 21 CIR122 Marker 109.2 (cM) Automated name-based View Maps
NAU3009 Marker 99.9 Cotton - HDC - 4 CLU1341 Marker 80.4 (cM) Automated name-based View Maps
NAU3791 Marker 110.7 Cotton - TH - 22 NAU3791 Marker 108.5 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU3791 Marker 62.8 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU3791 Marker 98.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU3791 Marker Cotton 34,539,101 - 34,539,850 (bp) Automated name-based View Maps
Cotton - HDC - 4 NAU3791 Marker 86.3 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU3791 Marker 30.1 (cM) Automated name-based View Maps
NAU5236 Marker 113.4 Cotton - Graimondii_physical - Gr_Chr12 NAU5236 Marker Cotton 35,214,411 - 35,215,335 (bp) Automated name-based View Maps
Cotton - HDC - 4 NAU5236 Marker 87.7 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU5236 Marker 18.6 (cM) Automated name-based View Maps
NAU2235 Marker 115 Cotton - Guazuncho2xVH8-RIL - c4 NAU2235a Marker 3.48 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU3877 Marker 88.6 (cM) Automated name-based View Maps
Cotton - GVc - 4 NAU2235 Marker 5 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU2235 Marker 31.3 (cM) Automated name-based View Maps
Cotton - GVc - 22 NAU2235 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU3877 Marker 102.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 NAU2235b Marker 3.59 (cM) Automated name-based View Maps
NAU1151 Marker 126.1 Cotton - HDC - 5 NAU1151 Marker 23.2 (cM) Automated name-based View Maps
Cotton - GVc - 5 NAU1151 Marker 117 (cM) Automated name-based View Maps
Cotton - HDC - 6 NAU1151 Marker 110.9 (cM) Automated name-based View Maps
Cotton - TH - 6 NAU1151 Marker 90.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU1151 Marker 95.7 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU1151 Marker 99.5 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU1151 Marker 74.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 NAU1151 Marker 300.4 (cM) Automated name-based View Maps
BNL3089 Marker 0 Cotton - E3 - 4 BNL3089 Marker 137.3 (cM) Automated name-based View Maps
Cotton - T3 - 4 BNL3089 Marker 13.66 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL3089 Marker Cotton 69,826,068 - 69,826,391 (bp) Automated name-based View Maps
Cotton - HDC - 4 BNL3089 Marker 14.4 (cM) Automated name-based View Maps
STV103 Marker 5.2 Cotton - HDC - 4 CLU4015 Marker 18.3 (cM) Automated name-based View Maps
Cotton - TH - 19 STV103 Marker 175.6 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU4015 Marker 4.8 (cM) Automated name-based View Maps
NAU3127 Marker 7.3 Cotton - Graimondii_physical - Gr_Chr07 NAU3127 Marker Cotton 4,925,771 - 4,926,444 (bp) Automated name-based View Maps
Cotton - HDC - 4 NAU3127 Marker 19.9 (cM) Automated name-based View Maps
NAU3649 Marker 8.9 Cotton - TH - 19 NAU3649 Marker 172.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU3649 Marker Cotton 69,177,226 - 69,177,972 (bp) Automated name-based View Maps
Cotton - HDC - 19 NAU3649 Marker 8.4 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU3649 Marker 21.1 (cM) Automated name-based View Maps
NAU3592 Marker 10.6 Cotton - Graimondii_physical - Gr_Chr09 NAU3592 Marker Cotton 69,167,369 - 69,168,069 (bp) Automated name-based View Maps
Cotton - HDC - 4 NAU3592 Marker 22.3 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU3592 Marker 119.3 (cM) Automated name-based View Maps
Y1296 Marker 15.5 Cotton - HDC - 4 Y1296 Marker 26 (cM) Automated name-based View Maps
NAU3469 Marker 16 Cotton - HDC - 4 NAU3469 Marker 26.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU3469 Marker Cotton 67,086,237 - 67,086,994 (bp) Automated name-based View Maps
NAU1577 Marker 19.3 Cotton - HDC - 4 NAU1577 Marker 28.8 (cM) Automated name-based View Maps
NAU2701 Marker 24 Cotton - HDC - 4 NAU2701 Marker 32.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU2701 Marker Cotton 67,281,805 - 67,282,517 (bp) Automated name-based View Maps
NAU3491 Marker 24.8 Cotton - E3 - 4 NAU3491 Marker 85.6 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU3465 Marker 49 (cM) Automated name-based View Maps
NAU2363 Marker 30.9 Cotton - HDC - 4 NAU2363 Marker 37.5 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU2363 Marker 63.9 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU2363 Marker 69.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU2363 Marker 65.6 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU2363 Marker 60.1 (cM) Automated name-based View Maps
E10M15-100 Marker 38.7 Cotton - HDC - 4 E10M15-100 Marker 43.3 (cM) Automated name-based View Maps
BNL4047 Marker 44 Cotton - CH - 4 BNL4047 Marker 62.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 BNL4047 Marker 47.3 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL4047 Marker 44.8 (cM) Automated name-based View Maps
Cotton - E3 - 4 BNL4047 Marker 90.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL4047 Marker Cotton 48,435,195 - 48,435,679 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 BNL4047 Marker 39.98 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL4047 Marker 109.2 (cM) Automated name-based View Maps
EM1OD22-80 Marker 45.9 Cotton - HDC - 4 EM1OD22-80 Marker 48.4 (cM) Automated name-based View Maps
NAU3491 Marker 47 Cotton - E3 - 4 NAU3491 Marker 85.6 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU3465 Marker 49 (cM) Automated name-based View Maps
Y1184 Marker 52 Cotton - HDC - 4 Y1184 Marker 52 (cM) Automated name-based View Maps
NAU3205 Marker 52.6 Cotton - HDC - 4 NAU3205 Marker 52.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU3205 Marker Cotton 47,321,669 - 47,322,527 (bp) Automated name-based View Maps