CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 9
Map Start: 0 cM
Map Stop: 133.9 cM
Features by Type:
84 Marker
84 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 84.       of 4 | Next
Cotton - TH - 9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E12M12-80 Marker 0 Cotton - HDC - 9 E12M12-80 Marker 24.8 (cM) Automated name-based View Maps
NAU5468 Marker 1.4 Cotton - HDC - 9 NAU5468 Marker 25.9 (cM) Automated name-based View Maps
Cotton - E3 - 9 NAU5468 Marker 0 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 NAU5468 Marker Cotton 496,620 - 497,159 (bp) Automated name-based View Maps
BNL0686 Marker 1.9 Cotton - Guazuncho2xVH8-BC2 - c23 BNL686 Marker 5.2 (cM) Automated name-based View Maps
Cotton - CH - 23 BNL0686 Marker 178.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 BNL0686a Marker 3.29 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 BNL0686 Marker Cotton 1,175,850 - 1,176,236 (bp) Automated name-based View Maps
Cotton - T3 - 9 BNL0686 Marker 139.43 (cM) Automated name-based View Maps
Cotton - E3 - 23 BNL0686 Marker 17.2 (cM) Automated name-based View Maps
Cotton - HDC - 9 BNL0686 Marker 26.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 BNL686 Marker 51.3 (cM) Automated name-based View Maps
Cotton - GVc - 9 BNL0686 Marker 19.5 (cM) Automated name-based View Maps
Cotton - T3 - 23 BNL0686 Marker 141.35 (cM) Automated name-based View Maps
Cotton - TH - 23 BNL0686 Marker 24.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c9 BNL686 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 23 BNL0686 Marker 5.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 BNL0686b Marker 2.64 (cM) Automated name-based View Maps
Cotton - HDC - 23 BNL0686 Marker 33.2 (cM) Automated name-based View Maps
TMF17-250 Marker 6.5 Cotton - HDC - 9 TMF17-250 Marker 27.9 (cM) Automated name-based View Maps
NAU3888 Marker 7.7 Cotton - HDC - 23 CLU4520 Marker 41.4 (cM) Automated name-based View Maps
Cotton - TH - 23 NAU3888 Marker 32.1 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU4520 Marker 28.3 (cM) Automated name-based View Maps
Cotton - E3 - 23 NAU3888 Marker 29 (cM) Automated name-based View Maps
Cotton - E3 - 9 NAU3888 Marker 13.8 (cM) Automated name-based View Maps
NAU3538 Marker 9.8 Cotton - HDC - 9 NAU3538 Marker 29 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 NAU3538 Marker Cotton 3,050,747 - 3,051,538 (bp) Automated name-based View Maps
JESPR274 Marker 13.3 Cotton - CH - 23 JESPR274 Marker 130.6 (cM) Automated name-based View Maps
Cotton - HDC - 9 JESPR274 Marker 42.1 (cM) Automated name-based View Maps
Cotton - HDC - 23 JESPR274 Marker 69.8 (cM) Automated name-based View Maps
Cotton - HDC - 9 JESPR274 Marker 30.3 (cM) Automated name-based View Maps
Cotton - T3 - 23 JESPR274 Marker 104.97 (cM) Automated name-based View Maps
Cotton - E3 - 23 JESPR274 Marker 55 (cM) Automated name-based View Maps
Cotton - TH - 23 JESPR274 Marker 52.5 (cM) Automated name-based View Maps
Cotton - T3 - 9 JESPR274 Marker 114.33 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 JESPR274 Marker Cotton 45,440,347 - 45,440,605 (bp) Automated name-based View Maps
NAU6668 Marker 17 Cotton - HDC - 9 NAU6668 Marker 31.6 (cM) Automated name-based View Maps
NAU6177 Marker 18.9 Cotton - HDC - 9 NAU6177 Marker 32.3 (cM) Automated name-based View Maps
NAU6418 Marker 20.6 Cotton - HDC - 9 NAU6418 Marker 32.9 (cM) Automated name-based View Maps
E12M3-250 Marker 22.7 Cotton - HDC - 9 E12M3-250 Marker 33.6 (cM) Automated name-based View Maps
NAU3159 Marker 26.4 Cotton - TH - 23 NAU3159 Marker 40.7 (cM) Automated name-based View Maps
Cotton - HDC - 9 NAU3159 Marker 42.1 (cM) Automated name-based View Maps
Cotton - GVc - 9 NAU3159 Marker 32.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 NAU3159 Marker Cotton 6,837,186 - 6,837,852 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 NAU3159a Marker 18.85 (cM) Automated name-based View Maps
Cotton - E3 - 23 NAU3159 Marker 33.8 (cM) Automated name-based View Maps
Cotton - HDC - 23 NAU3159 Marker 51 (cM) Automated name-based View Maps
NAU3101 Marker 29.6 Cotton - Graimondii_physical - Gr_Chr06 NAU3101 Marker Cotton 7,236,576 - 7,237,371 (bp) Automated name-based View Maps
Cotton - HDC - 9 NAU3101 Marker 36.1 (cM) Automated name-based View Maps
BNL1162 Marker 31.2 Cotton - E3 - 9 BNL1162 Marker 39.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 BNL1162 Marker 31.6 (cM) Automated name-based View Maps
Cotton - PK - c9 BNL1162 Marker 30.4 (cM) Automated name-based View Maps
Cotton - CH - 9 BNL1162 Marker 148.8 (cM) Automated name-based View Maps
Cotton - HDC - 9 BNL1162 Marker 36.7 (cM) Automated name-based View Maps
Cotton - T3 - 9 BNL1162 Marker 122.36 (cM) Automated name-based View Maps
CIR019 Marker 31.9 Cotton - CH - 9 CIR019 Marker 151.8 (cM) Automated name-based View Maps
Cotton - T3 - 23 CIR019 Marker 115.25 (cM) Automated name-based View Maps
Cotton - HDC - 9 CIR019 Marker 37.2 (cM) Automated name-based View Maps
Cotton - HDC - 23 CIR019 Marker 62.7 (cM) Automated name-based View Maps
Cotton - GVc - 23 CIR019 Marker 10.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 CIR019 Marker 7.3 (cM) Automated name-based View Maps
Cotton - T3 - 9 CIR019 Marker 121.5 (cM) Automated name-based View Maps
Cotton - CH - 23 CIR019 Marker 158.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 CIR019 Marker Cotton 9,518,959 - 9,519,147 (bp) Automated name-based View Maps
E11M10-95 Marker 34.6 Cotton - HDC - 9 E11M10-95 Marker 38.6 (cM) Automated name-based View Maps
OD3GA38-600 Marker 35.7 Cotton - HDC - 9 OD3GA38-600 Marker 39.2 (cM) Automated name-based View Maps
NAU5318 Marker 36.9 Cotton - HDC - 9 CLU1336 Marker 39.8 (cM) Automated name-based View Maps
NAU6272 Marker 37.2 Cotton - HDC - 9 NAU6272 Marker 39.9 (cM) Automated name-based View Maps
Y3999-240 Marker 37.7 Cotton - HDC - 9 Y3999-240 Marker 40.2 (cM) Automated name-based View Maps
Y1357-245 Marker 38 Cotton - HDC - 9 Y1357-245 Marker 40.3 (cM) Automated name-based View Maps
NAU5017 Marker 38 Cotton - HDC - 9 NAU5017 Marker 40.3 (cM) Automated name-based View Maps
Cotton - E3 - 9 NAU5017 Marker 53.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 NAU5017 Marker Cotton 11,553,553 - 11,554,492 (bp) Automated name-based View Maps
BNL3626 Marker 38.2 Cotton - PK - c9 BNL3626 Marker 30.4 (cM) Automated name-based View Maps
Cotton - HDC - 9 BNL3626 Marker 23.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 BNL3626 Marker Cotton 14,075,774 - 14,076,253 (bp) Automated name-based View Maps
Cotton - CH - 9 BNL3626 Marker 150.3 (cM) Automated name-based View Maps
E10M6-160 Marker 39.8 Cotton - HDC - 9 E10M6-160 Marker 41.3 (cM) Automated name-based View Maps
JESPR274 Marker 41.5 Cotton - HDC - 9 JESPR274 Marker 30.3 (cM) Automated name-based View Maps
Cotton - HDC - 23 JESPR274 Marker 69.8 (cM) Automated name-based View Maps
Cotton - HDC - 9 JESPR274 Marker 42.1 (cM) Automated name-based View Maps
Cotton - CH - 23 JESPR274 Marker 130.6 (cM) Automated name-based View Maps
Cotton - E3 - 23 JESPR274 Marker 55 (cM) Automated name-based View Maps
Cotton - TH - 23 JESPR274 Marker 52.5 (cM) Automated name-based View Maps
Cotton - T3 - 9 JESPR274 Marker 114.33 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 JESPR274 Marker Cotton 45,440,347 - 45,440,605 (bp) Automated name-based View Maps
Cotton - T3 - 23 JESPR274 Marker 104.97 (cM) Automated name-based View Maps