CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-HDC
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 16
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - HDC [ View Map Set Info ]
Map Name: 16
Map Start: 0 cM
Map Stop: 139.6 cM
Features by Type:
278 Marker
278 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 278.       of 12 | Next
Cotton - HDC - 16
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
pAR869 Marker 79.9 Cotton - PK - c16 pAR869 Marker 87.8 (cM) Automated name-based View Maps
NAU6310 Marker 48.8 Cotton - HDC - 24 NAU6310 Marker 96 (cM) Automated name-based View Maps
Cotton - TH - 24 NAU6310 Marker 88.1 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU6310 Marker 78.1 (cM) Automated name-based View Maps
pAR04_09 Marker 3.3 No other positions
NAU3004 Marker 118.3 Cotton - E3 - 16 NAU3004 Marker 16.7 (cM) Automated name-based View Maps
E31M7-M86.9 Marker 80 Cotton - GVc - 16 E31M7-M86.9 Marker 83 (cM) Automated name-based View Maps
STV007 Marker 49.4 Cotton - TH - 16 STV007 Marker 77.7 (cM) Automated name-based View Maps
MUSB0958 Marker 3.9 Cotton - HDC - 10 MUSB0958 Marker 107.4 (cM) Automated name-based View Maps
Cotton - T3 - 1 MUSB0958 Marker 60.66 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUSB0958 Marker 58.8 (cM) Automated name-based View Maps
Cotton - T3 - 16 MUSB0958 Marker 124.44 (cM) Automated name-based View Maps
Cotton - HDC - 9 MUSB0958 Marker 46.8 (cM) Automated name-based View Maps
Cotton - T3 - 9 MUSB0958 Marker 110.44 (cM) Automated name-based View Maps
Cotton - GVc - 13 MUSB0958 Marker 89.1 (cM) Automated name-based View Maps
Cotton - T3 - 2 MUSB0958 Marker 53.27 (cM) Automated name-based View Maps
Cotton - HDC - 1 MUSB0958 Marker 73 (cM) Automated name-based View Maps
Cotton - GVc - 1 MUSB0958 Marker 70.8 (cM) Automated name-based View Maps
Cotton - GVc - 8 MUSB0958 Marker 122.7 (cM) Automated name-based View Maps
Cotton - HDC - 8 MUSB0958 Marker 108.6 (cM) Automated name-based View Maps
Cotton - HDC - 13 MUSB0958 Marker 63.1 (cM) Automated name-based View Maps
Cotton - GVc - 2 MUSB0958 Marker 47.4 (cM) Automated name-based View Maps
Cotton - GVc - 9 MUSB0958 Marker 41.5 (cM) Automated name-based View Maps
Cotton - T3 - 10 MUSB0958 Marker 82.33 (cM) Automated name-based View Maps
E3M4_370 Marker 118.8 Cotton - GVc - 16 E3M4_370 Marker 121.2 (cM) Automated name-based View Maps
Cotton - GVc - 16 E3M4_370 Marker 118.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 E3M4_370 Marker 203.9 (cM) Automated name-based View Maps
E3M52-M246.9 Marker 80 Cotton - GVc - 16 E3M52-M246.9 Marker 83 (cM) Automated name-based View Maps
BNL1395 Marker 49.4 Cotton - HDC - 7 BNL1395 Marker 62 (cM) Automated name-based View Maps
Cotton - T3 - 7 BNL1395 Marker 91.65 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1395 Marker 80.88 (cM) Automated name-based View Maps
A1619 Marker 7.3 Cotton - PK - c22 A1619 Marker 44.9 (cM) Automated name-based View Maps
Cotton - PK - c16 A1619 Marker 4.8 (cM) Automated name-based View Maps
Cotton - HDC - 22 A1619 Marker 48.3 (cM) Automated name-based View Maps
E1M54-M260.0 Marker 119.2 Cotton - GVc - 16 E1M54-M260.0 Marker 121.6 (cM) Automated name-based View Maps
NAU0751 Marker 80 Cotton - TH - 16 NAU0751 Marker 61.4 (cM) Automated name-based View Maps
Cotton - GVc - 16 NAU0751 Marker 83.1 (cM) Automated name-based View Maps
HAU1145 Marker 49.6 Cotton - E3 - 16 HAU1145 Marker 107.3 (cM) Automated name-based View Maps
P01_24 Marker 7.3 Cotton - HDC - 11 P01_24 Marker 107 (cM) Automated name-based View Maps
Cotton - PK - c16 P01_24 Marker 4.8 (cM) Automated name-based View Maps
Cotton - PK - A03 P01_24 Marker 109.8 (cM) Automated name-based View Maps
MUSS095 Marker 119.5 Cotton - T3 - 16 MUSS095 Marker 4.4 (cM) Automated name-based View Maps
Cotton - E3 - 16 MUSS095 Marker 6.7 (cM) Automated name-based View Maps
NAU2881 Marker 80 Cotton - HDC - 8 NAU2881 Marker 62.9 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU2881 Marker 54.2 (cM) Automated name-based View Maps
Cotton - E3 - 16 NAU2881 Marker 76 (cM) Automated name-based View Maps
NAU4017 Marker 49.6 Cotton - TH - 16 NAU4017 Marker 77.5 (cM) Automated name-based View Maps
CLU1647 Marker 7.4 Cotton - E3 - 16 HAU2688 Marker 152.9 (cM) Automated name-based View Maps
CLU4048 Marker 120 Cotton - TH - 16 NAU2597 Marker 11.2 (cM) Automated name-based View Maps
Cotton - E3 - 16 NAU2597 Marker 13.6 (cM) Automated name-based View Maps
NAU2628 Marker 80.2 Cotton - TH - 16 NAU2628 Marker 62.5 (cM) Automated name-based View Maps
Cotton - E3 - 16 NAU2628 Marker 74.7 (cM) Automated name-based View Maps
NAU4943 Marker 49.8 Cotton - TH - 16 NAU4943 Marker 77.4 (cM) Automated name-based View Maps
CMS26 Marker 8.4 Cotton - PK - c16 CMS26 Marker 6.1 (cM) Automated name-based View Maps
pAR934 Marker 120.1 Cotton - HDC - 6 pAR934 Marker 97.1 (cM) Automated name-based View Maps
Cotton - GVc - 13 pAR934 Marker 60.3 (cM) Automated name-based View Maps
Cotton - HDC - 13 pAR934 Marker 74.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 pAR934 Marker 103.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 pAR934 Marker 71.6 (cM) Automated name-based View Maps
Cotton - PK - c6 pAR934 Marker 44.5 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR934 Marker 58.8 (cM) Automated name-based View Maps
Cotton - PK - c16 pAR934 Marker 139.7 (cM) Automated name-based View Maps
Cotton - GVc - 7 pAR934 Marker 27.3 (cM) Automated name-based View Maps
E43M52-M387.4 Marker 80.3 Cotton - GVc - 16 E43M52-M387.4 Marker 83.4 (cM) Automated name-based View Maps