CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-HDC
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - HDC [ View Map Set Info ]
Map Name: 1
Map Start: 0 cM
Map Stop: 152.4 cM
Features by Type:
200 Marker
200 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 200.       of 8 | Next
Cotton - HDC - 1
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TME03-150 Marker 90.4 Cotton - TH - 1 TME03-150 Marker 58.7 (cM) Automated name-based View Maps
CLU1355 Marker 61 Cotton - CH - 15 MGHES10 Marker 95 (cM) Automated name-based View Maps
Cotton - T3 - 1 MGHES10 Marker 62.85 (cM) Automated name-based View Maps
Cotton - E3 - 1 MGHES10 Marker 37.8 (cM) Automated name-based View Maps
Cotton - TH - 1 JESPR240 Marker 69.6 (cM) Automated name-based View Maps
Cotton - T3 - 1 JESPR240 Marker 62.67 (cM) Automated name-based View Maps
Cotton - E3 - 1 NAU3533 Marker 37.8 (cM) Automated name-based View Maps
Cotton - GVc - 1 MGHES10 Marker 70.9 (cM) Automated name-based View Maps
Cotton - T3 - 15 JESPR240 Marker 64.25 (cM) Automated name-based View Maps
Cotton - CH - 1 MGHES10 Marker 77.6 (cM) Automated name-based View Maps
Cotton - GVc - 15 MGHES10 Marker 69.1 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3533 Marker 73.8 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU1355 Marker 80.5 (cM) Automated name-based View Maps
Cotton - T3 - 15 MGHES10 Marker 64.22 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU3533 Marker 70 (cM) Automated name-based View Maps
Cotton - TH - 15 JESPR240 Marker 60.7 (cM) Automated name-based View Maps
Gate1CB06 Marker 90.7 Cotton - PK - c1 Gate1CB06 Marker 138.4 (cM) Automated name-based View Maps
CLU271 Marker 61.2 Cotton - E3 - 1 Gh216 Marker 37.8 (cM) Automated name-based View Maps
Cotton - T3 - 1 Gh216 Marker 62.78 (cM) Automated name-based View Maps
CLU105 Marker 90.9 Cotton - HDC - 15 CLU105 Marker 100.3 (cM) Automated name-based View Maps
Cotton - T3 - 15 TMB1181 Marker 45.02 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU105 Marker 115.6 (cM) Automated name-based View Maps
Cotton - GVc - 24 CIR370 Marker 84.3 (cM) Automated name-based View Maps
Cotton - T3 - 1 TMB1181 Marker 39.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 CIR370 Marker 119.1 (cM) Automated name-based View Maps
E3M7_420 Marker 63 Cotton - GVc - 1 E3M7_420 Marker 45.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 E3M7_420 Marker 120.8 (cM) Automated name-based View Maps
JESPR259 Marker 91 Cotton - TH - 10 JESPR259 Marker 57.9 (cM) Automated name-based View Maps
Cotton - TH - 1 JESPR259 Marker 57.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 JESPR259 Marker 96.5 (cM) Automated name-based View Maps
CIR018 Marker 63.4 Cotton - E3 - 1 CIR018 Marker 34.8 (cM) Automated name-based View Maps
Cotton - TH - 1 CIR018 Marker 67.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR018 Marker 59.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 CIR018 Marker 97.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CIR018 Marker 122.5 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR018 Marker 56.1 (cM) Automated name-based View Maps
Cotton - GVc - 1 CIR018 Marker 48.1 (cM) Automated name-based View Maps
UCcg11166_953 Marker 91.3 Cotton - T3 - 1 UCcg11166_953 Marker 38.98 (cM) Automated name-based View Maps
CLU318 Marker 63.6 Cotton - T3 - 1 JESPR289 Marker 61.24 (cM) Automated name-based View Maps
Cotton - E3 - 1 Gh336 Marker 46.4 (cM) Automated name-based View Maps
Cotton - TH - 1 JESPR289 Marker 68.8 (cM) Automated name-based View Maps
Cotton - T3 - 1 Gh336 Marker 64.83 (cM) Automated name-based View Maps
TMB0283 Marker 91.3 Cotton - HDC - 15 TMB0283 Marker 100.8 (cM) Automated name-based View Maps
Cotton - T3 - 15 TMB0283 Marker 44.69 (cM) Automated name-based View Maps
Cotton - T3 - 1 TMB0283 Marker 38.98 (cM) Automated name-based View Maps
TMD03-275 Marker 63.8 Cotton - TH - 1 TMD03-275 Marker 66.7 (cM) Automated name-based View Maps
Unig27H12 Marker 91.4 Cotton - HDC - 11 Unig27H12 Marker 107 (cM) Automated name-based View Maps
Cotton - PK - c1 Unig27H12 Marker 142.1 (cM) Automated name-based View Maps
Cotton - PK - A03 Unig27H12 Marker 109.8 (cM) Automated name-based View Maps
E3M4_420 Marker 63.9 Cotton - GVc - 1 E3M4_420 Marker 50.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 E3M4_420 Marker 125.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c1 E3M4_420 Marker 66.5 (cM) Automated name-based View Maps
pAR132 Marker 91.9 Cotton - PK - c1 pAR132 Marker 144.3 (cM) Automated name-based View Maps
JESPR090 Marker 64 Cotton - TH - 1 JESPR090 Marker 66.1 (cM) Automated name-based View Maps
Cotton - TH - 8 JESPR090 Marker 76.1 (cM) Automated name-based View Maps
Cotton - HDC - 8 JESPR090 Marker 98 (cM) Automated name-based View Maps
BNL1355 Marker 92.1 Cotton - TH - 1 BNL1355 Marker 55.8 (cM) Automated name-based View Maps
NAU3022 Marker 64.1 Cotton - TH - 1 NAU3022 Marker 65.9 (cM) Automated name-based View Maps
A1204 Marker 92.2 Cotton - PK - c1 A1204 Marker 131.6 (cM) Automated name-based View Maps
Cotton - GVc - 1 A1204 Marker 96 (cM) Automated name-based View Maps
Cotton - PK - c1 A1204 Marker 145.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 A1204 Marker 183.8 (cM) Automated name-based View Maps
CLU3854 Marker 64.3 Cotton - TH - 20 NAU2182 Marker 68.8 (cM) Automated name-based View Maps
Cotton - E3 - 1 NAU2182 Marker 33.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU3854 Marker 77 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU2182 Marker 65.4 (cM) Automated name-based View Maps
MUSB1064 Marker 93 Cotton - T3 - 10 MUSB1064 Marker 62.18 (cM) Automated name-based View Maps
Cotton - T3 - 1 MUSB1064 Marker 37.03 (cM) Automated name-based View Maps
Cotton - HDC - 10 MUSB1064 Marker 81.7 (cM) Automated name-based View Maps
Cotton - HDC - 6 MUSB1064 Marker 87.4 (cM) Automated name-based View Maps
Cotton - E3 - 6 MUSB1064 Marker 94.8 (cM) Automated name-based View Maps
CLU1511 Marker 64.6 Cotton - E3 - 1 NAU4891 Marker 19.6 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU4891 Marker 64.8 (cM) Automated name-based View Maps
CLU1534 Marker 93.1 Cotton - TH - 1 NAU5107 Marker 54 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU1534 Marker 111 (cM) Automated name-based View Maps
Cotton - E3 - 15 HAU2425 Marker 114.4 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU5107 Marker 118 (cM) Automated name-based View Maps
NAU5085 Marker 64.8 Cotton - TH - 1 NAU5085 Marker 64.4 (cM) Automated name-based View Maps
Cotton - TH - 15 NAU5085 Marker 54.2 (cM) Automated name-based View Maps
Cotton - HDC - 15 NAU5085 Marker 92.1 (cM) Automated name-based View Maps
pGH468 Marker 93.1 Cotton - PK - c15 pGH468 Marker 96.7 (cM) Automated name-based View Maps
Cotton - HDC - 15 pGH468 Marker 126.5 (cM) Automated name-based View Maps
Cotton - PK - c1 pGH468 Marker 147.2 (cM) Automated name-based View Maps