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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cupuaçu-THEGR_consensus
(Reference Set)
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Correspondences
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Maps Chr05
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cupuaçu - Theobroma_grandiflorum_consensus [ View Map Set Info ]
Map Name: Chr05
Map Start: 0 cM
Map Stop: 156.66 cM
Features by Type:
183 Marker
183 Total

Map Features

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Items 1 to 25 of 183.       of 8 | Next
Cupuaçu - Theobroma_grandiflorum_consensus - Chr05
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
2M17545806 Marker 143.42 Cupuaçu - THEGR_174 - Chr05 2M17545806 Marker 115.19 (cM) Automated name-based, Automated name-based View Maps
5M1161432 Marker 22.77 Cupuaçu - THEGR_174 - Chr05 5M1161432 Marker 19.12 (cM) Automated name-based, Automated name-based View Maps
5M1244365 Marker 0 Cupuaçu - THEGR_1074 - Chr05 5M1244365 Marker 0 (cM) Automated name-based, Automated name-based View Maps
5M1246073 Marker 6.08 Cupuaçu - THEGR_1074 - Chr05 5M1246073 Marker 6.24 (cM) Automated name-based, Automated name-based View Maps
5M1311610 Marker 32.86 Cupuaçu - THEGR_1074 - Chr05 5M1311610 Marker 33.08 (cM) Automated name-based, Automated name-based View Maps
5M13732976 Marker 61.32 Cupuaçu - THEGR_1074 - Chr05 5M13732976 Marker 61.34 (cM) Automated name-based, Automated name-based View Maps
5M13830763 Marker 61.66 Cupuaçu - THEGR_1074 - Chr05 5M13830763 Marker 62.07 (cM) Automated name-based, Automated name-based View Maps
5M1387226 Marker 27.89 No other positions
5M1420886 Marker 26.64 Cupuaçu - THEGR_174 - Chr05 5M1420886 Marker 22.01 (cM) Automated name-based, Automated name-based View Maps
5M1430076 Marker 27.06 Cupuaçu - THEGR_174 - Chr05 5M1430076 Marker 23.55 (cM) Automated name-based, Automated name-based View Maps
5M1457398 Marker 24.89 Cupuaçu - THEGR_174 - Chr05 5M1457398 Marker 27.64 (cM) Automated name-based, Automated name-based View Maps
5M1513930 Marker 30.33 Cupuaçu - THEGR_174 - Chr05 5M1513930 Marker 28.42 (cM) Automated name-based, Automated name-based View Maps
5M16571311 Marker 62.27 Cupuaçu - THEGR_174 - Chr05 5M16571311 Marker 59.87 (cM) Automated name-based, Automated name-based View Maps
5M1658833 Marker 33.88 Cupuaçu - THEGR_1074 - Chr05 5M1658833 Marker 34.05 (cM) Automated name-based, Automated name-based View Maps
5M1696314 Marker 32.17 Cupuaçu - THEGR_1074 - Chr05 5M1696314 Marker 32.27 (cM) Automated name-based, Automated name-based View Maps
5M1721734 Marker 39.35 Cupuaçu - THEGR_174 - Chr05 5M1721734 Marker 36.69 (cM) Automated name-based, Automated name-based View Maps
5M17624137 Marker 62.72 Cupuaçu - THEGR_174 - Chr05 5M17624137 Marker 60.45 (cM) Automated name-based, Automated name-based View Maps
5M17917702 Marker 61.49 Cupuaçu - THEGR_174 - Chr05 5M17917702 Marker 61.44 (cM) Automated name-based, Automated name-based View Maps
5M18684456 Marker 48.78 Cupuaçu - THEGR_174 - Chr05 5M18684456 Marker 55.88 (cM) Automated name-based, Automated name-based View Maps
5M1939768 Marker 36.1 Cupuaçu - THEGR_174 - Chr05 5M1939768 Marker 33.5 (cM) Automated name-based, Automated name-based View Maps
5M2036278 Marker 40.61 Cupuaçu - THEGR_1074 - Chr05 5M2036278 Marker 37.19 (cM) Automated name-based, Automated name-based View Maps
5M2047880 Marker 35.41 Cupuaçu - THEGR_174 - Chr05 5M2047880 Marker 33.94 (cM) Automated name-based, Automated name-based View Maps
5M2072132 Marker 38.77 Cupuaçu - THEGR_1074 - Chr05 5M2072132 Marker 38.57 (cM) Automated name-based, Automated name-based View Maps
5M21262354 Marker 62.55 Cupuaçu - THEGR_1074 - Chr05 5M21262354 Marker 62.94 (cM) Automated name-based, Automated name-based View Maps
5M2161628 Marker 38.32 Cupuaçu - THEGR_1074 - Chr05 5M2161628 Marker 38.69 (cM) Automated name-based, Automated name-based View Maps