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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_PF
(Reference Set)
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Correspondences
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Maps 3
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_PF [ View Map Set Info ]
Map Name: 3
Map Start: 0 cM
Map Stop: 147.8 cM
Features by Type:
11 Marker
4 QTL
15 Total

Map Features

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Items 1 to 15 of 15.
Maize - Genetic_map_PF - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
im30p1 Marker 65.7 Maize - Genetic_map_IBM2 - 3 im30p1 Marker 284.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BM3 - 3 im30p1 Marker 86.2 (cM) Automated name-based, Automated name-based View Maps
umc39a Marker 95.5 Maize - Genetic_map_C1old - 3 umc39a Marker 138 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1 - 3 umc39a Marker 139.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 3 umc39a Marker 186.9 (cM) Automated name-based, Automated name-based View Maps
umc63c Marker 129.4 Maize - Genetic_map_BM3 - 3 umc63c Marker 149.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IF - 5 umc63c Marker 231 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 3 umc63c Marker 226.6 (cM) Automated name-based, Automated name-based View Maps
umc2a Marker 147.8 Maize - Genetic_map_C5 - 3 umc2a Marker 282.8 (cM) Automated name-based, Automated name-based View Maps
umc10a Marker 43.3 Maize - Genetic_map_C1 - 3 umc10a Marker 56.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1old - 3 umc10a Marker 57 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 3 umc10a Marker 72.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BM3 - 3 umc10a Marker 65.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IF - 3 umc10a Marker 36 (cM) Automated name-based, Automated name-based View Maps
umc26a Marker 53 Maize - Genetic_map_IBM2 - 3 umc26a Marker 258.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BM3 - 3 umc26a Marker 76.6 (cM) Automated name-based, Automated name-based View Maps
umc60 Marker 80.2 Maize - Genetic_map_IBM2 - 3 umc60 Marker 327.1 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BM3 - 3 umc60 Marker 110 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IF - 3 umc60 Marker 81 (cM) Automated name-based, Automated name-based View Maps
umc16a Marker 110.9 Maize - Genetic_map_Lo1 - 3 umc16a Marker 59.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BM3 - 3 umc16a Marker 130.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 3 umc16a Marker 199.4 (cM) Automated name-based, Automated name-based View Maps
umc96 Marker 135.3 Maize - Genetic_map_C1old - 3 umc96 Marker 186 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 3 umc96 Marker 248.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1 - 3 umc96 Marker 188.3 (cM) Automated name-based, Automated name-based View Maps
me3 Marker 12 Maize - Genetic_map_C5 - 3 me3 Marker 29.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1old - 3 me3 Marker 23 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1 - 3 me3 Marker 22.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 1 me3 Marker 278.5 (cM) Automated name-based, Automated name-based View Maps
umc102a Marker 50.3 Maize - Genetic_map_IBM2 - 3 umc102a Marker 232.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 3 umc102a Marker 135 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_KG1 - 3 umc102a Marker 57.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BM3 - 3 umc102a Marker 68.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 3 umc102a Marker 83.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BM3 - 3 umc102a Marker 67.5 (cM) Automated name-based, Automated name-based View Maps
546 QTL 80.2 - 95.5 No other positions
548 QTL 129.4 - 135.3 No other positions
545 QTL 12 - 43.3 No other positions
547 QTL 110.9 - 129.4 No other positions