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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_PF
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_PF [ View Map Set Info ]
Map Name: 5
Map Start: 0 cM
Map Stop: 110.1 cM
Features by Type:
5 Marker
1 QTL
6 Total

Map Features

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Items 1 to 6 of 6.
Maize - Genetic_map_PF - 5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
csu108a(gbp) Marker 13.4 Maize - Genetic_map_IF - 5 csu108a(gbp) Marker 54 (cM) Automated name-based, Automated name-based View Maps
csu36b(rpL19) Marker 53.1 Maize - Genetic_map_C6 - 5 csu36b(rpL19) Marker 109.8 (cM) Automated name-based, Automated name-based View Maps
rab28 Marker 11.5 No other positions
umc107b(croc) Marker 26 Maize - Genetic_map_C1 - 5 umc107b(croc) Marker 30.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1old - 5 umc107b(croc) Marker 30 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 5 umc107b(croc) Marker 46 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 5 umc107b(croc) Marker 44.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BM3 - 5 umc107b(croc) Marker 56 (cM) Automated name-based, Automated name-based View Maps
ant1 Marker 110.1 No other positions
553 QTL 32.6 - 110.1 No other positions