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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Sugarcane-R570_Raboin_2006
(Reference Set)
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Correspondences
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Maps group53
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sugarcane - R570_Raboin_2006 [ View Map Set Info ]
Map Name: group53
Map Start: 0 cM
Map Stop: 72.9 cM
Features by Type:
9 Marker
9 Total

Map Features

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Items 1 to 9 of 9.
Sugarcane - R570_Raboin_2006 - group53
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
mSSCIR55m2 Marker 9.2 Sugarcane - R570AF_Rossi_2003 - III2 mSSCIR55m8 Marker 0 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group22 mSSCIR55m11 Marker 0.6 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group82 mSSCIR55m9 Marker 9.9 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - III8 mSSCIR55m5 Marker 0 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group161 mSSCIR55m10 Marker 46.2 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - III7 mSSCIR55m9 Marker 14.9 (cM) Automated name-based View Maps
mSSCIR70m2 Marker 0 Sugarcane - R570AF_Rossi_2003 - III8 mSSCIR70m3 Marker 21.3 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group161 mSSCIR70m9 Marker 65.5 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - III3 mSSCIR70m2 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group82 mSSCIR70m7 Marker 9.4 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - III10 mSSCIR70m1 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - III7 mSSCIR70m7 Marker 39.3 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - III2 mSSCIR70m6 Marker 16.7 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group190 mSSCIR70m8 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group27 mSSCIR70m3 Marker 57.7 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group22 mSSCIR70m11 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - IIIb mSSCIR70m4 Marker 0 (cM) Automated name-based View Maps
aggctg2 Marker 22 Sugarcane - R570AF_Hoarau_2001 - group23 aggctg2 Marker 12.2 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - III3 aggctg2 Marker 14.9 (cM) Automated name-based View Maps
aggctc12 Marker 48 Sugarcane - R570AF_Rossi_2003 - III3 aggctc12 Marker 43.9 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group23 aggctc12 Marker 46.7 (cM) Automated name-based View Maps
agcctt19 Marker 29 Sugarcane - R570AF_Rossi_2003 - III3 agcctt19 Marker 18.5 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group23 agcctt19 Marker 19.1 (cM) Automated name-based View Maps
agcctax2 Marker 28 No other positions
agccag9 Marker 4 Sugarcane - R570AF_Rossi_2003 - III3 agccag9 Marker 12.5 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group23 agccag9 Marker 8.8 (cM) Automated name-based View Maps
acactc19 Marker 72.9 Sugarcane - R570AF_Rossi_2003 - III3 acactc19 Marker 71.7 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group23 acactc19 Marker 79.5 (cM) Automated name-based View Maps
acacaaX1 Marker 46.8 No other positions