CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cocoa-IMC78xCatongo
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - IMC78xCatongo [ View Map Set Info ]
Map Name: LG3
Map Start: 0 cM
Map Stop: 66.1 cM
Features by Type:
7 Marker
2 QTL
9 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 9 of 9.
Cocoa - IMC78xCatongo - LG3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AFLP_IxC13/20 Marker 66.1 No other positions
AFLP_IxC55/13 Marker 44.2 No other positions
AFLP_IxC1/9 Marker 37.7 No other positions
AFLP_IxC15/24 Marker 33.4 No other positions
AFLP_IxC5/6 Marker 0 No other positions
gTcCIR107 Marker 24 Cocoa - test - LG3 gTcCIR107 Marker 40.6 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG3 gTcCIR107 Marker 40.6 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG3 gTcCIR107 Marker 40.6 (cM) Automated name-based View Maps
cTcCIR47 Marker 9.5 Cocoa - consensus_disease_res - LG3 cTcCIR47 Marker 16.3 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG3 cTcCIR47 Marker 16.3 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG3 cTcCIR47 Marker 16.3 (cM) Automated name-based View Maps
Cocoa - DR1xCatongo - LG3 cTcCIR47 Marker 0 (cM) Automated name-based View Maps
Cocoa - test - LG3 cTcCIR47 Marker 16.3 (cM) Automated name-based View Maps
IxC_BLG_lg3 QTL 24 - 44 No other positions
IxC_WBW_lg3 QTL 24 - 44 No other positions