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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Physical_map_IBM2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Maize - Physical_map_IBM2 [ View Map Set Info ]
Map Name: 5
Map Start: 0 bp
Map Stop: 217.74 bp
Features by Type:
157 Marker
157 Total

Map Features

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Items 1 to 25 of 157.       of 7 | Next
Maize - Physical_map_IBM2 - 5
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
umc1990 Marker 139.23 No other positions
TEL5S Marker 0 Rice - Synthethic_map - 5 TEL5S Marker 0 (bp) Automated name-based, Automated name-based View Maps
B264B Marker 175.66 Rice - Synthethic_map - 2 B264B Marker 21.93 (bp) Automated name-based, Automated name-based View Maps
B325B Marker 20.94 - 20.95 Rice - Synthethic_map - 3 B325B Marker 20.48 - 20.49 (bp) Automated name-based, Automated name-based View Maps
B551B Marker 52.77 Rice - Synthethic_map - 6 B551B Marker 28.87 (bp) Automated name-based, Automated name-based View Maps
B225E Marker 82.92 Rice - Synthethic_map - 2 B225E Marker 3.35 (bp) Automated name-based, Automated name-based View Maps
B254E Marker 164.51 - 164.52 Rice - Synthethic_map - 2 B254E Marker 18.59 - 18.6 (bp) Automated name-based, Automated name-based View Maps
B341B Marker 13.67 - 13.68 Rice - Synthethic_map - 3 B341B Marker 27.06 (bp) Automated name-based, Automated name-based View Maps
B274E Marker 207.19 Rice - Synthethic_map - 2 B274E Marker 31.4 (bp) Automated name-based, Automated name-based View Maps
B094E Marker 33.66 Rice - Synthethic_map - 10 B094E Marker 14.68 - 14.69 (bp) Automated name-based, Automated name-based View Maps
B241E Marker 142.22 Rice - Synthethic_map - 2 B241E Marker 8.58 (bp) Automated name-based, Automated name-based View Maps
umc1253 Marker 0.89 No other positions
B264E Marker 178.52 Rice - Synthethic_map - 2 B264E Marker 22.47 (bp) Automated name-based, Automated name-based View Maps
B106B Marker 22.38 Rice - Synthethic_map - 10 B106B Marker 19.9 (bp) Automated name-based, Automated name-based View Maps
umc1 Marker 60.99 - 61 No other positions
B226E Marker 102.48 - 102.49 Rice - Synthethic_map - 2 B226E Marker 5.08 (bp) Automated name-based, Automated name-based View Maps
B253E Marker 164.92 - 164.93 Rice - Synthethic_map - 2 B253E Marker 18.45 (bp) Automated name-based, Automated name-based View Maps
B211B Marker 14.08 - 14.09 Rice - Synthethic_map - 12 B211B Marker 27.06 (bp) Automated name-based, Automated name-based View Maps
B280E Marker 209.96 Rice - Synthethic_map - 2 B280E Marker 32.25 - 32.26 (bp) Automated name-based, Automated name-based View Maps
B094B Marker 34.56 Rice - Synthethic_map - 10 B094B Marker 14.32 (bp) Automated name-based, Automated name-based View Maps
B239E Marker 145.56 - 145.57 Rice - Synthethic_map - 2 B239E Marker 7.75 (bp) Automated name-based, Automated name-based View Maps
B357B Marker 1.62 Rice - Synthethic_map - 3 B357B Marker 35.09 (bp) Automated name-based, Automated name-based View Maps
umc1155 Marker 180.19 No other positions
B105B Marker 23.68 Rice - Synthethic_map - 10 B105B Marker 19.46 (bp) Automated name-based, Automated name-based View Maps
B551E Marker 62.11 - 62.12 Rice - Synthethic_map - 6 B551E Marker 30.53 (bp) Automated name-based, Automated name-based View Maps