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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Guazuncho2xVH8-BC2
(Reference Set)
Min.
Correspondences
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Maps D03
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-BC2 [ View Map Set Info ]
Map Name: D03
Map Start: 0 cM
Map Stop: 78.5 cM
Features by Type:
18 Marker
18 Total

Map Features

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Items 1 to 18 of 18.
Cotton - Guazuncho2xVH8-BC2 - D03
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL3860 Marker 0 Cotton - HDC - 24 BNL3860 Marker 50.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL3860 Marker 39 (cM) Automated name-based View Maps
Cotton - TH - 24 BNL3860 Marker 57.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL3860 Marker 18.59 (cM) Automated name-based View Maps
Cotton - PK - D03 BNL3860 Marker 44.5 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL3860 Marker 43.5 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL3860 Marker 27.3 (cM) Automated name-based View Maps
BNL2961 Marker 20.6 Cotton - Guazuncho2xVH8-BC1 - D03 BNL2961 Marker 63.5 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL2961 Marker 79.83 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL2961 Marker 47.7 (cM) Automated name-based View Maps
Cotton - PK - D03 BNL2961 Marker 74.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL2961b Marker 41.99 (cM) Automated name-based View Maps
Cotton - T3 - 24 BNL2961 Marker 61.12 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL2961 Marker Cotton 50,946,501 - 50,946,964 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 BNL2961 Marker 87.3 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL2961 Marker 73.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - A02 BNL2961 Marker 23.8 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL2961 Marker 67.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL2961 Marker 71.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL2961 Marker 72.3 (cM) Automated name-based View Maps
E3M5_184 Marker 38.7 Cotton - HDC - 24 E3M5_184 Marker 88.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 E3M5_184 Marker 95.8 (cM) Automated name-based View Maps
Cotton - GVc - 24 E3M5_184 Marker 62.9 (cM) Automated name-based View Maps
E7M1_193 Marker 45.3 Cotton - HDC - 24 E7M1_193 Marker 97.6 (cM) Automated name-based View Maps
Cotton - GVc - 24 E7M1_193 Marker 70.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 E7M1_193 Marker 110.6 (cM) Automated name-based View Maps
E1M7_153 Marker 47.1 No other positions
E6M5_350 Marker 50.1 Cotton - GVc - 24 E6M5_350 Marker 77.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 E6M5_350 Marker 113.3 (cM) Automated name-based View Maps
Cotton - HDC - 24 E6M5_350 Marker 106.6 (cM) Automated name-based View Maps
E2M5_356 Marker 50.1 No other positions
E4M3_94 Marker 50.1 Cotton - Guazuncho2xVH8-BC1 - D03 E4M3_94 Marker 114.6 (cM) Automated name-based View Maps
Cotton - GVc - 24 E4M3_94 Marker 80.7 (cM) Automated name-based View Maps
Cotton - HDC - 24 E4M3_94 Marker 111.5 (cM) Automated name-based View Maps
E5M6_119 Marker 50.1 No other positions
E4M7_134 Marker 50.1 Cotton - GVc - 24 E4M7_134 Marker 80 (cM) Automated name-based View Maps
Cotton - HDC - 24 E4M7_134 Marker 110.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 E4M7_134 Marker 114.6 (cM) Automated name-based View Maps
E6M5_237 Marker 50.1 Cotton - Guazuncho2xVH8-BC1 - D03 E6M5_237 Marker 114.6 (cM) Automated name-based View Maps
Cotton - HDC - 24 E6M5_237 Marker 109.4 (cM) Automated name-based View Maps
Cotton - GVc - 24 E6M5_237 Marker 79.1 (cM) Automated name-based View Maps
E5M8_176 Marker 52.1 Cotton - GVc - 24 E5M8_176 Marker 82.4 (cM) Automated name-based View Maps
Cotton - HDC - 24 E5M8_176 Marker 113.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 E5M8_176 Marker 115.9 (cM) Automated name-based View Maps
E5M5_269 Marker 53.1 No other positions
E7M4_287 Marker 53.1 Cotton - Guazuncho2xVH8-BC1 - D03 E7M4_287 Marker 116.8 (cM) Automated name-based View Maps
Cotton - GVc - 24 E7M4_287 Marker 83.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 E7M4_287 Marker 114.4 (cM) Automated name-based View Maps
E4M3_117 Marker 54 No other positions
BNL3627 Marker 66.7 Cotton - GVc - 24 BNL3627 Marker 99.3 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3627 Marker 37.3 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL3627 Marker 145.2 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL3627 Marker 36.72 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL3627 Marker 120.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL3627 Marker 136.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL3627a Marker 82.32 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL3627 Marker 130.6 (cM) Automated name-based View Maps
Cotton - TH - 8 BNL3627 Marker 85.3 (cM) Automated name-based View Maps
Cotton - CH - 8 BNL3627 Marker 148.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL3627 Marker Cotton 4,069,298 - 4,069,687 (bp) Automated name-based View Maps
Cotton - E3 - 8 BNL3627 Marker 15.3 (cM) Automated name-based View Maps
Cotton - PK - A02 BNL3627 Marker 128.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 BNL3627c Marker 36.06 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3627 Marker 78.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3627 Marker 41 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3627 Marker 109.7 (cM) Automated name-based View Maps
BNL1646 Marker 68.7 Cotton - CH - 8 BNL1646 Marker 147.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - A02 BNL1646 Marker 99.5 (cM) Automated name-based View Maps
Cotton - TH - 24 BNL1646 Marker 114.3 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU13 Marker 78.4 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL1646 Marker 160.1 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL1646 Marker 182.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 BNL1646 Marker 214.3 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU13 Marker 135.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL1646 Marker 138.1 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL1646 Marker 101.7 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU13 Marker 133 (cM) Automated name-based View Maps
E2M1_242 Marker 78.5 No other positions