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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Guazuncho2xVH8-BC2
(Reference Set)
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Maps c17
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Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-BC2 [ View Map Set Info ]
Map Name: c17
Map Start: 0 cM
Map Stop: 136.2 cM
Features by Type:
18 Marker
18 Total

Map Features

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Items 1 to 18 of 18.
Cotton - Guazuncho2xVH8-BC2 - c17
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E4M8_183 Marker 0 No other positions
E7M2_181 Marker 2.9 Cotton - Guazuncho2xVH8-BC1 - c17 E7M2_181 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 17 E7M2_181 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 17 E7M2_181 Marker 102 (cM) Automated name-based View Maps
E2M7_280 Marker 5.8 Cotton - GVc - 17 E2M7_280 Marker 3.3 (cM) Automated name-based View Maps
Cotton - HDC - 17 E2M7_280 Marker 98.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 E2M7_280 Marker 4 (cM) Automated name-based View Maps
BNL3408 Marker 6.4 Cotton - Guazuncho2xVH8-RIL - c3 BNL3408b Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL3408a Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL3408 Marker 4 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3408 Marker 14.26 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL3408 Marker 56 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3408 Marker 27.7 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL3408 Marker 4.2 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL3408 Marker 43.5 (cM) Automated name-based View Maps
Cotton - PK - c17 BNL3408 Marker 55.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3408 Marker 94.68 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3408 Marker Cotton 42,143,440 - 42,143,677 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3408 Marker 96.2 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3408 Marker 0.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3408 Marker 110.2 (cM) Automated name-based View Maps
E4M4_195 Marker 14.2 No other positions
BNL2443 Marker 35.9 Cotton - Graimondii_physical - Gr_Chr03 BNL2443 Marker Cotton 36,198,720 - 36,199,283 (bp) Automated name-based View Maps
Cotton - HDC - 3 BNL2443 Marker 87.3 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2443 Marker 73.3 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2443 Marker 50.9 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL2443 Marker 86.3 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2443 Marker 82.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL2443a Marker 20.66 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL2443 Marker 18 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL2443 Marker 26.4 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL2443 Marker 92.59 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL2443b Marker 16.49 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2443 Marker 22 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL2443c Marker 14.55 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL2443 Marker 23 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL2443 Marker 61.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL2443 Marker 90 (cM) Automated name-based View Maps
Cotton - TH - 3 BNL2443 Marker 31.7 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL2443 Marker 24.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL2443 Marker 25.4 (cM) Automated name-based View Maps
E4M5_238 Marker 38.4 Cotton - HDC - 17 E4M5_238 Marker 80.7 (cM) Automated name-based View Maps
Cotton - GVc - 17 E4M5_238 Marker 20 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 E4M5_238 Marker 26.6 (cM) Automated name-based View Maps
E3M5_134 Marker 60.9 Cotton - Guazuncho2xVH8-BC1 - c17 E3M5_134 Marker 44.3 (cM) Automated name-based View Maps
Cotton - GVc - 17 E3M5_134 Marker 27.4 (cM) Automated name-based View Maps
Cotton - HDC - 17 E3M5_134 Marker 71.9 (cM) Automated name-based View Maps
BNL3590 Marker 79 Cotton - HDC - 17 BNL3590 Marker 52.9 (cM) Automated name-based View Maps
Cotton - E3 - 2 BNL3590 Marker 76.8 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3590 Marker 43.39 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL3590 Marker 36.3 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3590 Marker 70.7 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 45.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL3590 Marker 27.8 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3590 Marker 72.6 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL3590 Marker 50.7 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL3590 Marker 60.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL3590 Marker 57.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3590 Marker Cotton 18,634,806 - 18,635,181 (bp) Automated name-based View Maps
Cotton - CH - 2 BNL3590 Marker 45.3 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 79.7 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL3590 Marker 65.7 (cM) Automated name-based View Maps
E3M1_135 Marker 83.6 No other positions
E3M6_233 Marker 84.7 Cotton - GVc - 17 E3M6_233 Marker 34.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 E3M6_233 Marker 42.7 (cM) Automated name-based View Maps
Cotton - HDC - 17 E3M6_233 Marker 62.8 (cM) Automated name-based View Maps
E1M1_122 Marker 86.8 Cotton - HDC - 17 E1M1_122 Marker 66.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 E1M1_122 Marker 44.3 (cM) Automated name-based View Maps
Cotton - GVc - 17 E1M1_122 Marker 31 (cM) Automated name-based View Maps
E2M3_162 Marker 86.8 Cotton - Guazuncho2xVH8-BC1 - c17 E2M3_162 Marker 46.9 (cM) Automated name-based View Maps
Cotton - GVc - 17 E2M3_162 Marker 30.6 (cM) Automated name-based View Maps
Cotton - HDC - 17 E2M3_162 Marker 67.5 (cM) Automated name-based View Maps
E7M7_127 Marker 87.3 No other positions
E2M6_149 Marker 88.6 No other positions
E1M3_184 Marker 95.3 No other positions
E7M1_252 Marker 120.4 Cotton - Guazuncho2xVH8-BC1 - c17 E7M1_252 Marker 73.5 (cM) Automated name-based View Maps
Cotton - GVc - 17 E7M1_252 Marker 53.4 (cM) Automated name-based View Maps
Cotton - HDC - 17 E7M1_252 Marker 43.9 (cM) Automated name-based View Maps
BNL834 Marker 136.2 Cotton - GVc - 17 BNL0834 Marker 70.6 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL0834 Marker 127.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL834 Marker 91.4 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL0834 Marker 6.75 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL0834 Marker 6.8 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL0834 Marker 148 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL0834 Marker 111.5 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL0834 Marker 26.7 (cM) Automated name-based View Maps