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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set)
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Correspondences
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Maps c10
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c10
Map Start: 0 cM
Map Stop: 67.71 cM
Features by Type:
23 Marker
23 Total

Map Features

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Items 1 to 23 of 23.
Cotton - Guazuncho2xVH8-RIL - c10
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E35M54-M429.0 Marker 0 No other positions
E31M48-M190.7 Marker 5.91 No other positions
E32M50-M100.5 Marker 8.56 No other positions
E32M50-M360.5 Marker 9.29 No other positions
CIR171a Marker 11.47 Cotton - GVc - 20 CIR171 Marker 96.2 (cM) Automated name-based View Maps
Cotton - CH - 10 CIR171 Marker 28.3 (cM) Automated name-based View Maps
Cotton - E3 - 10 CIR171 Marker 111 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR171 Marker 60.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR171 Marker 54.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 CIR171 Marker Cotton 43,500,729 - 43,501,031 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 CIR171b Marker 57.32 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR171 Marker 161 (cM) Automated name-based View Maps
BNL3895 Marker 16.05 Cotton - GVc - 10 BNL3895 Marker 71.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3895 Marker Cotton 23,404,944 - 23,405,314 (bp) Automated name-based View Maps
Cotton - CH - 10 BNL3895 Marker 29.6 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL3895 Marker 68.86 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 BNL3895 Marker 64.5 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL3895 Marker 101.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL3895 Marker 77.9 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL3895 Marker 60.9 (cM) Automated name-based View Maps
E36M47-M170.9 Marker 21.95 No other positions
E41M47-M374.6 Marker 24.59 No other positions
BNL1161b Marker 26.55 Cotton - Guazuncho2xVH8-BC1 - c23 BNL1161 Marker 76.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 BNL1161a Marker 11.85 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 BNL1161 Marker 75.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL1161 Marker 97.4 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL1161 Marker 57.55 (cM) Automated name-based View Maps
Cotton - GVc - 23 BNL1161 Marker 21.3 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL1161 Marker 84.6 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL1161 Marker 63 (cM) Automated name-based View Maps
Cotton - PK - c10 BNL1161 Marker 111.2 (cM) Automated name-based View Maps
Cotton - T3 - 23 BNL1161 Marker 125.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c23 BNL1161 Marker 24.6 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL1161 Marker 86.2 (cM) Automated name-based View Maps
E32M49-M254.8 Marker 29.04 No other positions
CIR055b Marker 30.17 Cotton - GVc - 10 CIR055 Marker 91.7 (cM) Automated name-based View Maps
Cotton - GVc - 1 CIR055 Marker 56.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 CIR055 Marker 46.78 (cM) Automated name-based View Maps
CIR082 Marker 36.89 Cotton - TH - 10 CIR082 Marker 68.8 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR082 Marker 104.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 CIR082 Marker Cotton 44,921,579 - 44,921,823 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR082 Marker 120.6 (cM) Automated name-based View Maps
BNL2960 Marker 41.59 Cotton - CH - 10 BNL2960 Marker 61.5 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL2960 Marker 114 (cM) Automated name-based View Maps
Cotton - PK - c10 BNL2960 Marker 130.9 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL2960 Marker 80 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL2960 Marker 40.73 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL2960 Marker 134 (cM) Automated name-based View Maps
NAU1182 Marker 43.77 Cotton - TH - 10 NAU1182 Marker 76.5 (cM) Automated name-based View Maps
Cotton - GVc - 10 NAU1182 Marker 112.2 (cM) Automated name-based View Maps
Cotton - T3 - 10 NAU1182 Marker 36.85 (cM) Automated name-based View Maps
Cotton - CH - 10 NAU1182 Marker 63.8 (cM) Automated name-based View Maps
Cotton - CH - 10 NAU1182 Marker 64 (cM) Automated name-based View Maps
MUSS096b Marker 46.6 Cotton - T3 - 20 MUSS096 Marker 88.79 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 MUSS096a Marker 75.6 (cM) Automated name-based View Maps
Cotton - T3 - 10 MUSS096 Marker 17.91 (cM) Automated name-based View Maps
Cotton - E3 - 20 MUSS096 Marker 59 (cM) Automated name-based View Maps
Cotton - GVc - 20 MUSS096 Marker 116.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 MUSS096 Marker Cotton 56,043,112 - 56,043,865 (bp) Automated name-based View Maps
Cotton - GVc - 10 MUSS096 Marker 116.9 (cM) Automated name-based View Maps
CIR305b Marker 57.28 Cotton - Guazuncho2xVH8-RIL - c20 CIR305a Marker 47.25 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR305 Marker 134.1 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR305 Marker 81.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 CIR305 Marker Cotton 58,501,383 - 58,501,606 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR305 Marker 134.1 (cM) Automated name-based View Maps
Cotton - CH - 20 CIR305 Marker 59.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR305 Marker 168.2 (cM) Automated name-based View Maps
BNL2691a Marker 61.91 Cotton - Guazuncho2xVH8-RIL - c6 BNL2691b Marker 32.98 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL2691 Marker 71 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL2691 Marker 107 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL2691 Marker 131.7 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL2691 Marker 26.9 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL2691 Marker 37.05 (cM) Automated name-based View Maps
NAU1169 Marker 67.71 Cotton - TH - 20 NAU1169 Marker 104.8 (cM) Automated name-based View Maps
Cotton - GVc - 10 NAU1169 Marker 142.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 NAU1169 Marker 181.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU1169 Marker Cotton 60,679,849 - 60,680,446 (bp) Automated name-based View Maps
Cotton - CH - 10 NAU1169 Marker 120.6 (cM) Automated name-based View Maps
E35M48-M111.3 Marker 5.91 No other positions
E32M54-M376.8 Marker 6.17 No other positions
M99 Marker 6.61 Cotton - GVc - 10 M99 Marker 67.1 (cM) Automated name-based View Maps
E41M47-M68.9 Marker 8.92 No other positions
E43M50-M159.5 Marker 9.36 No other positions