CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c6
Map Start: 0 cM
Map Stop: 48.87 cM
Features by Type:
20 Marker
2 QTL
22 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 22 of 22.
Cotton - Guazuncho2xVH8-RIL - c6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR203 Marker 0 Cotton - GVc - 6 CIR203 Marker 17 (cM) Automated name-based View Maps
Cotton - CH - 6 CIR203 Marker 31.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 CIR203 Marker 25 (cM) Automated name-based View Maps
Cotton - T3 - 6 CIR203 Marker 110.27 (cM) Automated name-based View Maps
Cotton - TH - 6 CIR203 Marker 123.9 (cM) Automated name-based View Maps
CIR017 Marker 7.13 Cotton - Guazuncho2xVH8-BC1 - c6 CIR017 Marker 42.1 (cM) Automated name-based View Maps
Cotton - GVc - 6 CIR017 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 6 CIR017 Marker 119.86 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 CIR017 Marker Cotton 1,295,102 - 1,295,307 (bp) Automated name-based View Maps
Cotton - CH - 6 CIR017 Marker 13.9 (cM) Automated name-based View Maps
BNL3359b Marker 12.41 Cotton - TH - 6 BNL3359 Marker 135 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL3359 Marker 5.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL3359 Marker Cotton 813,375 - 814,071 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL3359 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL3359 Marker 12.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL3359 Marker 11.4 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL3359 Marker 129.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL3359a Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL3359 Marker 1.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL3359 Marker 11.1 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL3359 Marker 125.4 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL3359 Marker 8.6 (cM) Automated name-based View Maps
E43M49-M84.7 Marker 14.18 No other positions
E31M55-M220.2 Marker 15.64 Cotton - GVc - 6 E31M55-M220.2 Marker 51.7 (cM) Automated name-based View Maps
E32M50-M197.2 Marker 18.09 No other positions
E35M52-M452.9 Marker 18.98 No other positions
CIR405 Marker 22.23 Cotton - Guazuncho2xVH8-BC1 - c6 CIR405 Marker 127.4 (cM) Automated name-based View Maps
Cotton - GVc - 6 CIR405 Marker 57.5 (cM) Automated name-based View Maps
CIR079b Marker 23.98 Cotton - CH - 9 CIR079 Marker 201.3 (cM) Automated name-based View Maps
Cotton - GVc - 6 CIR079 Marker 59.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 CIR079 Marker 38.36 (cM) Automated name-based View Maps
Cotton - GVc - 13 CIR079 Marker 87.8 (cM) Automated name-based View Maps
E32M48-M236.4 Marker 24.96 No other positions
E31M61-M328.7 Marker 25.89 No other positions
E43M49-M250.5 Marker 26.65 No other positions
CIR291f Marker 27.85 Cotton - GVc - 8 CIR291 Marker 125.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 CIR291 Marker 31.6 (cM) Automated name-based View Maps
Cotton - TH - 8 CIR291 Marker 83.4 (cM) Automated name-based View Maps
Cotton - GVc - 12 CIR291 Marker 103.2 (cM) Automated name-based View Maps
Cotton - GVc - 6 CIR291 Marker 64.2 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR291 Marker 57 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 CIR291u Marker 56.36 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 CIR291 Marker 143.6 (cM) Automated name-based View Maps
Cotton - GVc - 13 CIR291 Marker 92 (cM) Automated name-based View Maps
Cotton - GVc - 9 CIR291 Marker 29 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 CIR291 Marker 147 (cM) Automated name-based View Maps
Cotton - GVc - 4 CIR291 Marker 48.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR291 Marker 59.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 CIR291 Marker 181.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 CIR291b Marker 34.04 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 CIR291 Marker 95.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 CIR291a Marker 49.39 (cM) Automated name-based View Maps
Cotton - TH - 10 CIR291 Marker 54.7 (cM) Automated name-based View Maps
Cotton - TH - 6 CIR291 Marker 59 (cM) Automated name-based View Maps
A1763 Marker 30.29 Cotton - Graimondii_physical - Gr_Chr10 A1763 Marker Cotton 54,082,819 - 54,083,584 (bp) Automated name-based View Maps
Cotton - PK - c4 A1763 Marker 134.6 (cM) Automated name-based View Maps
Cotton - GVc - 6 A1763 Marker 67.2 (cM) Automated name-based View Maps
BNL2691b Marker 32.98 Cotton - GVc - 10 BNL2691 Marker 131.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 BNL2691a Marker 61.91 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL2691 Marker 37.05 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL2691 Marker 26.9 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL2691 Marker 71 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL2691 Marker 107 (cM) Automated name-based View Maps
BNL2884 Marker 35.92 Cotton - CH - 6 BNL2884 Marker 117.6 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL2884 Marker 41.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL2884 Marker Cotton 57,271,338 - 57,271,690 (bp) Automated name-based View Maps
Cotton - GVc - 6 BNL2884 Marker 78.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL2884 Marker 80.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL2884 Marker 198.6 (cM) Automated name-based View Maps
Cotton - E3 - 6 BNL2884 Marker 113.2 (cM) Automated name-based View Maps
CIR128a Marker 48.87 Cotton - Graimondii_physical - Gr_Chr10 CIR128 Marker Cotton 60,957,975 - 60,958,156 (bp) Automated name-based View Maps
Cotton - E3 - 6 CIR128 Marker 154.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 CIR128 Marker 273.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 CIR128 Marker 273.2 (cM) Automated name-based View Maps
BNL1440a Marker 18.52 Cotton - PK - c25 BNL1440 Marker 84.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1440 Marker 84.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL1440 Marker 108.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1440 Marker Cotton 17,749,853 - 17,750,142 (bp) Automated name-based View Maps
Cotton - GVc - 6 BNL1440 Marker 48.6 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1440 Marker 79 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL1440 Marker 66.3 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1440 Marker 28.5 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL1440 Marker 68.81 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL1440b Marker 34.18 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1440 Marker 95.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1440 Marker 63.3 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1440 Marker 69.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL1440 Marker 43.9 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL1440 Marker 69.3 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL1440 Marker 89.4 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1440 Marker 65.31 (cM) Automated name-based View Maps
E43M48-M335.3 Marker 22.7 No other positions
BNL1064 Marker 25.34 Cotton - GVc - 6 BNL1064 Marker 63 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL1064 Marker 90.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1064 Marker Cotton 26,566,573 - 26,566,814 (bp) Automated name-based View Maps
Cotton - PK - c6 BNL1064 Marker 58 (cM) Automated name-based View Maps
Cotton - E3 - 6 BNL1064 Marker 93.4 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL1064 Marker 64.7 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL1064 Marker 56.46 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL1064 Marker 148 (cM) Automated name-based View Maps
eQTL_10_dpa_c6A QTL 1 - 5 No other positions
eQTL_10_dpa_c6B QTL 35 - 37 No other positions