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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set)
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Maps c7
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c7
Map Start: 0 cM
Map Stop: 74.48 cM
Features by Type:
21 Marker
1 QTL
22 Total

Map Features

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Items 1 to 22 of 22.
Cotton - Guazuncho2xVH8-RIL - c7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU1043b Marker 56.78 Cotton - GVc - 7 NAU1043 Marker 91 (cM) Automated name-based View Maps
Cotton - CH - 7 NAU1043 Marker 167.5 (cM) Automated name-based View Maps
E32M49-M245.0 Marker 59.25 No other positions
CIR320 Marker 74.48 Cotton - Guazuncho2xVH8-BC1 - c7 CIR320 Marker 212 (cM) Automated name-based View Maps
Cotton - T3 - 7 CIR320 Marker 22.24 (cM) Automated name-based View Maps
Cotton - GVc - 7 CIR320 Marker 113 (cM) Automated name-based View Maps
E31M48-M461.9 Marker 18.89 No other positions
E43M49-M302.0 Marker 22.64 No other positions
CIR028 Marker 0 Cotton - Guazuncho2xVH8-BC1 - c7 CIR028 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 7 CIR028 Marker 28.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 CIR028 Marker Cotton 54,419,308 - 54,419,641 (bp) Automated name-based View Maps
Cotton - CH - 8 CIR028 Marker 191.2 (cM) Automated name-based View Maps
E43M52-M270.9 Marker 18.39 Cotton - GVc - 7 E43M52-M270.9 Marker 45.2 (cM) Automated name-based View Maps
E43M52-M-553.6 Marker 19.51 Cotton - GVc - 7 E43M52-M-553.6 Marker 43.6 (cM) Automated name-based View Maps
JESPR228b Marker 19.88 Cotton - Guazuncho2xVH8-BC1 - c7 JESPR228 Marker 86.8 (cM) Automated name-based View Maps
Cotton - TH - 7 JESPR228 Marker 58.1 (cM) Automated name-based View Maps
Cotton - GVc - 7 JESPR228 Marker 37.5 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR228 Marker 57.5 (cM) Automated name-based View Maps
Cotton - T3 - 7 JESPR228 Marker 86.06 (cM) Automated name-based View Maps
Cotton - T3 - 16 JESPR228 Marker 76.37 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 JESPR228a Marker 21.24 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 JESPR228 Marker 100.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 JESPR228 Marker Cotton 24,530,390 - 24,530,827 (bp) Automated name-based View Maps
E35M50-M174.9 Marker 22.66 No other positions
E32M48-M121.0 Marker 23.67 No other positions
CIR323 Marker 24.48 Cotton - GVc - 7 CIR323 Marker 40.5 (cM) Automated name-based View Maps
E43M48-M271.3 Marker 25.48 No other positions
NAU2432b Marker 29.95 Cotton - E3 - 7 NAU2432 Marker 47.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 NAU2432a Marker 28.93 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU2432 Marker 71.1 (cM) Automated name-based View Maps
Cotton - TH - 7 NAU2432 Marker 90.6 (cM) Automated name-based View Maps
Cotton - GVc - 7 NAU2432 Marker 55.8 (cM) Automated name-based View Maps
Cotton - GVc - 16 NAU2432 Marker 70.6 (cM) Automated name-based View Maps
JESPR065c Marker 32.03 Cotton - GVc - 7 JESPR065 Marker 59.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 JESPR065d Marker 59.76 (cM) Automated name-based View Maps
Cotton - GVc - 5 JESPR065 Marker 108.6 (cM) Automated name-based View Maps
Cotton - TH - 7 JESPR065 Marker 55.4 (cM) Automated name-based View Maps
Cotton - GVc - 21 JESPR065 Marker 17.7 (cM) Automated name-based View Maps
Cotton - TH - 5 JESPR065 Marker 166.5 (cM) Automated name-based View Maps
Cotton - T3 - 5 JESPR065 Marker 140.19 (cM) Automated name-based View Maps
Cotton - GVc - 22 JESPR065 Marker 73 (cM) Automated name-based View Maps
Cotton - TH - 22 JESPR065 Marker 27.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 JESPR065a Marker 6.62 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 JESPR065 Marker 137.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 JESPR065b Marker 87.45 (cM) Automated name-based View Maps
MUSB0463 Marker 32.68 Cotton - T3 - 7 MUSB0463 Marker 63.12 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 MUSB0463 Marker Cotton 52,138,688 - 52,139,840 (bp) Automated name-based View Maps
Cotton - GVc - 7 MUSB0463 Marker 59.1 (cM) Automated name-based View Maps
CIR169 Marker 36.21 Cotton - CH - 16 CIR169 Marker 142.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 CIR169 Marker 150.1 (cM) Automated name-based View Maps
Cotton - GVc - 7 CIR169 Marker 66.9 (cM) Automated name-based View Maps
Cotton - E3 - 7 CIR169 Marker 41.5 (cM) Automated name-based View Maps
Cotton - T3 - 7 CIR169 Marker 57.28 (cM) Automated name-based View Maps
NAU2186a Marker 38.66 Cotton - GVc - 7 NAU2186 Marker 65.6 (cM) Automated name-based View Maps
Cotton - TH - 7 NAU2186 Marker 82.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU2186 Marker Cotton 12,454,678 - 12,455,229 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 NAU2186b Marker 36.4 (cM) Automated name-based View Maps
Cotton - GVc - 16 NAU2186 Marker 81.1 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU2186 Marker 62.4 (cM) Automated name-based View Maps
Cotton - TH - 7 NAU2186 Marker 52.7 (cM) Automated name-based View Maps
R2 Marker 42.88 Cotton - TH - 7 R2 Marker 44.7 (cM) Automated name-based View Maps
Cotton - GVc - 7 R2 Marker 74.7 (cM) Automated name-based View Maps
BNL1597 Marker 45.97 Cotton - Guazuncho2xVH8-BC1 - c7 BNL1597 Marker 176.2 (cM) Automated name-based View Maps
Cotton - GVc - 7 BNL1597 Marker 79.4 (cM) Automated name-based View Maps
Cotton - E3 - 7 BNL1597 Marker 28.4 (cM) Automated name-based View Maps
Cotton - PK - c7 BNL1597 Marker 169.2 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL1597 Marker 137.7 (cM) Automated name-based View Maps
CIR412 Marker 50.43 Cotton - Graimondii_physical - Gr_Chr01 CIR412 Marker Cotton 7,162,415 - 7,162,746 (bp) Automated name-based View Maps
Cotton - GVc - 7 CIR412 Marker 85 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 CIR412 Marker 181.7 (cM) Automated name-based View Maps
Cotton - T3 - 7 CIR412 Marker 44.45 (cM) Automated name-based View Maps
eQTL_10_dpa_c7 QTL 23 - 27 No other positions