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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set)
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Correspondences
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Maps c3
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c3
Map Start: 0 cM
Map Stop: 76.65 cM
Features by Type:
33 Marker
1 QTL
34 Total

Map Features

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Items 1 to 25 of 34.       of 2 | Next
Cotton - Guazuncho2xVH8-RIL - c3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E31M48-M102.1 Marker 23.14 No other positions
MUSB1101 Marker 23.95 Cotton - Graimondii_physical - Gr_Chr10 MUSB1101 Marker Cotton 34,325,736 - 34,326,535 (bp) Automated name-based View Maps
Cotton - T3 - 3 MUSB1101 Marker 89.52 (cM) Automated name-based View Maps
Cotton - GVc - 3 MUSB1101 Marker 37 (cM) Automated name-based View Maps
BNL1059b Marker 26.08 Cotton - CH - 3 BNL1059 Marker 14.9 (cM) Automated name-based View Maps
Cotton - TH - 14 BNL1059 Marker 69.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL1059 Marker 41 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL1059 Marker 37.8 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL1059 Marker 71.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL1059a Marker 51.63 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 BNL1059 Marker Cotton 35,898,072 - 35,898,293 (bp) Automated name-based View Maps
Cotton - CH - 14 BNL1059 Marker 94.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL1059 Marker 68.7 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL1059 Marker 55.8 (cM) Automated name-based View Maps
Cotton - E3 - 14 BNL1059 Marker 40.7 (cM) Automated name-based View Maps
E31M53-M113.1 Marker 26.63 Cotton - GVc - 3 E31M53-M113.1 Marker 39.5 (cM) Automated name-based View Maps
E43M48-M167.2 Marker 26.67 No other positions
E41M47-M452.7 Marker 30.64 No other positions
E43M53-M431.9 Marker 38.5 Cotton - GVc - 3 E43M53-M431.9 Marker 55.7 (cM) Automated name-based View Maps
NAU0862b Marker 70.42 Cotton - TH - 3 NAU0862 Marker 71.3 (cM) Automated name-based View Maps
Cotton - T3 - 3 NAU0862 Marker 8.74 (cM) Automated name-based View Maps
Cotton - GVc - 3 NAU0862 Marker 106.9 (cM) Automated name-based View Maps
CIR133 Marker 70.77 Cotton - Guazuncho2xVH8-RIL - c12 CIR133b Marker 56.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR133 Marker 143.4 (cM) Automated name-based View Maps
Cotton - GVc - 12 CIR133 Marker 103.6 (cM) Automated name-based View Maps
Cotton - GVc - 3 CIR133 Marker 107.6 (cM) Automated name-based View Maps
Cotton - CH - 3 CIR133 Marker 93.2 (cM) Automated name-based View Maps
Cotton - E3 - 3 CIR133 Marker 157.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 CIR133 Marker Cotton 62,794,705 - 62,795,053 (bp) Automated name-based View Maps
CIR228a Marker 76.65 Cotton - GVc - 3 CIR228 Marker 102.1 (cM) Automated name-based View Maps
Cotton - T3 - 3 CIR228 Marker 10.81 (cM) Automated name-based View Maps
Cotton - CH - 3 CIR228 Marker 79.8 (cM) Automated name-based View Maps
Cotton - T3 - 14 CIR228 Marker 17.81 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR228 Marker 107 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 CIR228 Marker Cotton 62,635,964 - 62,636,211 (bp) Automated name-based View Maps
Cotton - E3 - 3 CIR228 Marker 153.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 CIR228b Marker 88.01 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR228 Marker 137.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 CIR228 Marker 167.2 (cM) Automated name-based View Maps
NAU2161 Marker 73.31 Cotton - GVc - 3 NAU2161 Marker 110.4 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU2161 Marker 80.6 (cM) Automated name-based View Maps
JESPR107 Marker 70.4 Cotton - CH - 3 JESPR107 Marker 113.7 (cM) Automated name-based View Maps
Cotton - GVc - 3 JESPR107 Marker 106.9 (cM) Automated name-based View Maps
Cotton - TH - 3 JESPR107 Marker 68.5 (cM) Automated name-based View Maps
Cotton - E3 - 3 JESPR107 Marker 151.9 (cM) Automated name-based View Maps
BNL3259a Marker 61.12 Cotton - Guazuncho2xVH8-BC2 - c3 BNL3259 Marker 96.9 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL3259 Marker 167 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL3259 Marker 29.37 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c14 BNL3259 Marker 136.7 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL3259 Marker 99.6 (cM) Automated name-based View Maps
Cotton - TH - 3 BNL3259 Marker 54.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL3259 Marker 160.6 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3259 Marker 91.2 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3259 Marker 20.59 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL3259 Marker 73.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL3259b Marker 81.01 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3259 Marker 109.2 (cM) Automated name-based View Maps
CIR263 Marker 54.29 Cotton - Guazuncho2xVH8-RIL - c14 CIR263a Marker 73.57 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR263 Marker 88.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR263 Marker 103.9 (cM) Automated name-based View Maps
Cotton - GVc - 3 CIR263 Marker 80.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 CIR263 Marker Cotton 59,508,047 - 59,508,340 (bp) Automated name-based View Maps
Cotton - E3 - 3 CIR263 Marker 60.1 (cM) Automated name-based View Maps
NAU0972 Marker 52.09 Cotton - GVc - 3 NAU0972 Marker 76.4 (cM) Automated name-based View Maps
Cotton - CH - 3 NAU0972 Marker 36.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 NAU0972 Marker Cotton 58,710,715 - 58,711,355 (bp) Automated name-based View Maps
E41M47-M85.9 Marker 50.49 No other positions
E31M48-M79.3 Marker 48.53 No other positions
BNL3463 Marker 46.2 Cotton - CH - 3 BNL3463 Marker 30.1 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3463 Marker 42.48 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3463 Marker 66.7 (cM) Automated name-based View Maps
BNL3989 Marker 45.12 Cotton - CH - 3 BNL3989 Marker 27 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3989 Marker 90.5 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL3989 Marker 12.9 (cM) Automated name-based View Maps
Cotton - CH - 13 BNL3989 Marker 84.6 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3989 Marker 68.4 (cM) Automated name-based View Maps
BNL0226b Marker 42.12 Cotton - Guazuncho2xVH8-BC2 - c3 BNL226 Marker 67.6 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL0226 Marker 104.2 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL0226 Marker 62.6 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL0226 Marker 130.8 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL0226 Marker 78.7 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL0226 Marker 46.98 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL226 Marker 82.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c14 BNL226 Marker 99 (cM) Automated name-based View Maps
Cotton - TH - 3 BNL0226 Marker 16.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL0226a Marker 68.19 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL226 Marker 99.3 (cM) Automated name-based View Maps
E32M51-M247.7 Marker 38.32 No other positions
E32M49-M160.9 Marker 32.34 No other positions
E32M54-M109.8 Marker 30.52 No other positions
BNL3408b Marker 0 Cotton - GVc - 3 BNL3408 Marker 0.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3408 Marker Cotton 42,143,440 - 42,143,677 (bp) Automated name-based View Maps
Cotton - GVc - 17 BNL3408 Marker 4.2 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3408 Marker 27.7 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3408 Marker 94.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL3408 Marker 56 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL3408 Marker 4 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3408 Marker 14.26 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3408 Marker 6.4 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL3408 Marker 43.5 (cM) Automated name-based View Maps
Cotton - PK - c17 BNL3408 Marker 55.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL3408a Marker 0 (cM) Automated name-based View Maps
CIR030 Marker 8.95 Cotton - CH - 14 CIR030 Marker 47.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR030 Marker 9 (cM) Automated name-based View Maps
Cotton - GVc - 3 CIR030 Marker 12.2 (cM) Automated name-based View Maps
Cotton - E3 - 3 CIR030 Marker 63.8 (cM) Automated name-based View Maps
Cotton - T3 - 3 CIR030 Marker 85.01 (cM) Automated name-based View Maps