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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cocoa-(Sca6xH)xC1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - (Sca6xH)xC1 [ View Map Set Info ]
Map Name: LG4
Map Start: 0.00 cM
Map Stop: 69.90 cM
Features by Type:
21 Marker
21 Total

Map Features

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Items 1 to 21 of 21.
Cocoa - (Sca6xH)xC1 - LG4
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AFLP_SxHxC13/8 Marker 69.90 No other positions
AFLP_SxHxC13/13 Marker 66.90 No other positions
AFLP_SxHxC9/11 Marker 50.50 No other positions
AFLP_SxHxC1/3 Marker 37.40 No other positions
AFLP_SxHxC3/5 Marker 35.30 No other positions
AFLP_SxHxC15/10 Marker 33.90 No other positions
AFLP_SxHxC3/11 Marker 30.90 No other positions
AFLP_SxHxC14/4 Marker 22.50 No other positions
CA6 Marker 20.50 Cocoa - consensus_disease_res - LG4 CA6 Marker 28.20 (cM) Automated name-based View Maps
Cocoa - test - LG4 CA6 Marker 28.20 (cM) Automated name-based View Maps
AFLP_SxHxC8/13 Marker 18.50 No other positions
AFLP_SxHxC9/13 Marker 14.40 No other positions
AFLP_SxHxC5/2 Marker 13.50 No other positions
AFLP_SxHxC15/14 Marker 12.60 No other positions
AFLP_SxHxC13/17 Marker 10.60 No other positions
AFLP_SxHxC8/2 Marker 10.30 No other positions
AFLP_SxHxC13/2 Marker 9.70 No other positions
AFLP_SxHxC4/13 Marker 9.00 No other positions
AFLP_SxHxC11/16 Marker 6.70 No other positions
C3 Marker 62.80 Cocoa - SSR_SNP_consensus_map - LG4 C3 Marker 60.00 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG4 C3 Marker 66.80 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG4 C3 Marker 66.80 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc04 C3 Marker 22,465,078.00 - 22,465,216.00 (bp) Automated name-based View Maps
Cocoa - test - LG4 C3 Marker 66.80 (cM) Automated name-based View Maps
C104 Marker 0.00 Cocoa - ref_UPA402xUF676 - LG4 C104 Marker 3.40 (cM) Automated name-based View Maps
Cocoa - test - LG4 C104 Marker 3.40 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG4 C104 Marker 3.40 (cM) Automated name-based View Maps
mTcCIR12 Marker 27.50 Cocoa - DR1xCatongo - LG4 mTcCIR12 Marker 41.10 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG4 mTcCIR12 Marker 35.90 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG4 mTcCIR12 Marker 35.90 (cM) Automated name-based View Maps
Cocoa - IMC78xCatongo - LG4 mTcCIR12 Marker 37.00 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG4 mTcCIR12 Marker 33.10 (cM) Automated name-based View Maps
Cocoa - test - LG4 mTcCIR12 Marker 35.90 (cM) Automated name-based View Maps