CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Banana-AF_PAHANG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG04
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Banana - AF_PAHANG [ View Map Set Info ]
Map Name: LG04
Map Start: 0 cM
Map Stop: 170.32 cM
Features by Type:
20 Marker
20 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 20 of 20.
Banana - AF_PAHANG - LG04
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
mMaCIR1191 Marker 69.72 Banana - physical_map - chr4 mMaCIR1191 Marker Musa 14,898,931 - 14,899,736 (bp) Automated name-based View Maps
mMaCIR2099 Marker 70.06 No other positions
mMaCIR1477 Marker 70.75 Banana - physical_map - chr4 mMaCIR1477 Marker Musa 17,362,621 - 17,363,619 (bp) Automated name-based View Maps
mMaCIR1331 Marker 73.17 Banana - physical_map - chr4 mMaCIR1331 Marker Musa 18,540,633 - 18,541,372 (bp) Automated name-based View Maps
mMaCIR1751 Marker 0 Banana - physical_map - chr4 mMaCIR1751 Marker Musa 1,083,241 - 1,084,002 (bp) Automated name-based View Maps
mMaCIR1054 Marker 93.2 Banana - physical_map - chr4 mMaCIR1054 Marker Musa 21,544,104 - 21,544,884 (bp) Automated name-based View Maps
mMaCIR1326 Marker 30.69 Banana - physical_map - chr4 mMaCIR1326 Marker Musa 4,287,429 - 4,288,213 (bp) Automated name-based View Maps
mMaCIR1405 Marker 170.32 Banana - physical_map - chr4 mMaCIR1405 Marker Musa 29,624,996 - 29,625,800 (bp) Automated name-based View Maps
mMaCIR1282 Marker 69.56 Banana - physical_map - chr4 mMaCIR1282 Marker Musa 11,938,262 - 11,938,961 (bp) Automated name-based View Maps
mMaCIR1554 Marker 69.56 Banana - physical_map - chr4 mMaCIR1554 Marker Musa 12,190,424 - 12,192,455 (bp) Automated name-based View Maps
mMaCIR2939 Marker 69.56 Banana - physical_map - chr4 mMaCIR2939 Marker Musa 12,732,399 - 12,734,428 (bp) Automated name-based View Maps
mMaCIR1745 Marker 69.76 Banana - physical_map - chr4 mMaCIR1745 Marker Musa 14,069,511 - 14,071,481 (bp) Automated name-based View Maps
mMaCIR1210 Marker 70.06 Banana - physical_map - chr4 mMaCIR1210 Marker Musa 15,730,142 - 15,730,975 (bp) Automated name-based View Maps
mMaCIR1753 Marker 72.46 Banana - physical_map - chr4 mMaCIR1753 Marker Musa 18,461,297 - 18,462,109 (bp) Automated name-based View Maps
mMaCIR1045 Marker 75.82 Banana - physical_map - chr4 mMaCIR1045 Marker Musa 20,039,015 - 20,039,760 (bp) Automated name-based View Maps
mMaCIR0253 Marker 7.77 Banana - physical_map - chr4 mMaCIR0253 Marker Musa 1,703,768 - 1,704,075 (bp) Automated name-based View Maps
mMaCIR0267 Marker 136.94 Banana - AFCAM - LinkageGroup11 mMaCIR267 Marker 8.9 (cM) Automated name-based View Maps
Banana - physical_map - chr4 mMaCIR0267 Marker Musa 26,985,746 - 26,986,117 (bp) Automated name-based View Maps
mMaCIR1122 Marker 51.14 Banana - physical_map - chr4 mMaCIR1122 Marker Musa 7,924,962 - 7,925,751 (bp) Automated name-based View Maps
mMaCIR1413 Marker 69.56 Banana - physical_map - chr4 mMaCIR1413 Marker Musa 12,123,599 - 12,124,404 (bp) Automated name-based View Maps
mMaCIR2886 Marker 69.56 No other positions