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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-Graimondii_physical
(Reference Set)
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Correspondences
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Maps Gr_Chr01
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 Feature Options
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr01
Map Start: 0 bp
Map Stop: 55,383,879 bp
Features by Type:
273 Marker Cotton
273 Total

Map Features

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Items 1 to 25 of 273.       of 11 | Next
Cotton - Graimondii_physical - Gr_Chr01
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
A1182 Marker Cotton 12,310,138 - 12,311,167 Cotton - GVc - 7 A1182 Marker 72.8 (cM) Automated name-based View Maps
Cotton - PK - c3 A1182 Marker 52.3 (cM) Automated name-based View Maps
Cotton - PK - c16 A1182 Marker 82.6 (cM) Automated name-based View Maps
Cotton - PK - c7 A1182 Marker 157.8 (cM) Automated name-based View Maps
Cotton - GVc - 16 A1182 Marker 78.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 A1182 Marker 127.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 A1182 Marker 157.4 (cM) Automated name-based View Maps
A1189 Marker Cotton 7,890,348 - 7,891,461 Cotton - PK - c7 A1189 Marker 169.2 (cM) Automated name-based View Maps
A1311 Marker Cotton 25,219,098 - 25,220,158 Cotton - PK - c16 A1311 Marker 58.1 (cM) Automated name-based View Maps
A1364 Marker Cotton 49,585,269 - 49,586,174 Cotton - PK - c18 A1364 Marker 84.3 (cM) Automated name-based View Maps
A1437 Marker Cotton 21,686,886 - 21,687,536 Cotton - PK - c16 A1437 Marker 59 (cM) Automated name-based View Maps
A1478 Marker Cotton 1,247,342 - 1,248,737 Cotton - PK - c7 A1478 Marker 214.3 (cM) Automated name-based View Maps
A1524 Marker Cotton 23,520,904 - 23,521,474 Cotton - PK - c26 A1524 Marker 106.2 (cM) Automated name-based View Maps
A1597 Marker Cotton 3,998,627 - 4,000,118 Cotton - PK - c7 A1597 Marker 185.5 (cM) Automated name-based View Maps
A1604 Marker Cotton 18,535,773 - 18,536,850 Cotton - PK - c7 A1604 Marker 133.8 (cM) Automated name-based View Maps
A1619 Marker Cotton 54,527,798 - 54,529,052 Cotton - PK - c16 A1619 Marker 4.8 (cM) Automated name-based View Maps
Cotton - PK - c22 A1619 Marker 44.9 (cM) Automated name-based View Maps
A1620 Marker Cotton 2,596,920 - 2,597,771 Cotton - PK - c16 A1620 Marker 125.3 (cM) Automated name-based View Maps
BNL0580 Marker Cotton 15,030,457 - 15,030,838 Cotton - T3 - 7 BNL0580 Marker 64.88 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL0580 Marker 78.6 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL0580 Marker 56.53 (cM) Automated name-based View Maps
Cotton - CH - 16 BNL0580 Marker 48.3 (cM) Automated name-based View Maps
BNL1513 Marker Cotton 37,072,644 - 37,073,311 Cotton - CH - 24 BNL1513 Marker 53.2 (cM) Automated name-based View Maps
Cotton - E3 - 24 BNL1513 Marker 85.3 (cM) Automated name-based View Maps
Cotton - T3 - 24 BNL1513 Marker 79.08 (cM) Automated name-based View Maps
BNL1531 Marker Cotton 7,093,402 - 7,093,765 Cotton - T3 - 16 BNL1531 Marker 37.9 (cM) Automated name-based View Maps
Cotton - T3 - 7 BNL1531 Marker 43.29 (cM) Automated name-based View Maps
BNL2734 Marker Cotton 12,287,050 - 12,287,438 Cotton - E3 - 16 BNL2734 Marker 74.4 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL2734 Marker 117.3 (cM) Automated name-based View Maps
Cotton - CH - 16 BNL2734 Marker 69.5 (cM) Automated name-based View Maps
BNL2986 Marker Cotton 15,952,145 - 15,952,543 Cotton - Guazuncho2xVH8-RIL - c16 BNL2986 Marker 30.82 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL2986 Marker 57.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c16 BNL2986 Marker 46.1 (cM) Automated name-based View Maps
Cotton - CH - 16 BNL2986 Marker 54.1 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL2986 Marker 58.37 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL2986 Marker 67.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 BNL2986 Marker 119.4 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL2986 Marker 71.8 (cM) Automated name-based View Maps
BNL3008 Marker Cotton 12,327,665 - 12,327,992 Cotton - CH - 16 BNL3008 Marker 69 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL3008 Marker 74.4 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL3008 Marker 49.75 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 BNL3008 Marker 127.5 (cM) Automated name-based View Maps
Cotton - PK - c16 BNL3008 Marker 81.5 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL3008 Marker 63.2 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL3008 Marker 78.6 (cM) Automated name-based View Maps
BNL3065 Marker Cotton 48,325,097 - 48,325,708 Cotton - T3 - 16 BNL3065 Marker 107.42 (cM) Automated name-based View Maps
BNL3257 Marker Cotton 27,349,887 - 27,350,563 Cotton - Guazuncho2xVH8-BC1 - A02 BNL3257 Marker 170.6 (cM) Automated name-based View Maps
Cotton - TH - 8 BNL3257 Marker 71.4 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL3257 Marker 56.08 (cM) Automated name-based View Maps
Cotton - PK - A02 BNL3257 Marker 99.6 (cM) Automated name-based View Maps
Cotton - CH - 8 BNL3257 Marker 126.8 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3257 Marker 119.2 (cM) Automated name-based View Maps
BNL3793 Marker Cotton 6,876,491 - 6,877,038 Cotton - T3 - 16 BNL3793 Marker 37.07 (cM) Automated name-based View Maps
Cotton - TH - 7 BNL3793 Marker 39 (cM) Automated name-based View Maps
Cotton - T3 - 7 BNL3793 Marker 44.24 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL3793 Marker 65.6 (cM) Automated name-based View Maps
BNL3871 Marker Cotton 27,421,308 - 27,421,942 Cotton - E3 - 7 BNL3871 Marker 78.3 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL3871 Marker 89.3 (cM) Automated name-based View Maps
CIR028 Marker Cotton 54,419,308 - 54,419,641 Cotton - Guazuncho2xVH8-RIL - c7 CIR028 Marker 0 (cM) Automated name-based View Maps
Cotton - CH - 8 CIR028 Marker 191.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 CIR028 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 7 CIR028 Marker 28.6 (cM) Automated name-based View Maps
CIR100 Marker Cotton 12,757,196 - 12,757,404 Cotton - Guazuncho2xVH8-RIL - c16 CIR100 Marker 35.77 (cM) Automated name-based View Maps
Cotton - T3 - 16 CIR100 Marker 51.97 (cM) Automated name-based View Maps
Cotton - TH - 16 CIR100 Marker 64.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 CIR100 Marker 147.9 (cM) Automated name-based View Maps
Cotton - CH - 16 CIR100 Marker 68.5 (cM) Automated name-based View Maps
Cotton - GVc - 16 CIR100 Marker 80.3 (cM) Automated name-based View Maps
CIR107 Marker Cotton 8,839,579 - 8,839,829 Cotton - T3 - 16 CIR107 Marker 43.12 (cM) Automated name-based View Maps
Cotton - E3 - 16 CIR107 Marker 72.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 CIR107 Marker 41.89 (cM) Automated name-based View Maps
Cotton - GVc - 16 CIR107 Marker 89.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 CIR107 Marker 165.6 (cM) Automated name-based View Maps
Cotton - CH - 16 CIR107 Marker 78.2 (cM) Automated name-based View Maps
CIR207 Marker Cotton 2,351,803 - 2,352,050 Cotton - GVc - 11 CIR207 Marker 79.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 CIR207 Marker 92.6 (cM) Automated name-based View Maps