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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-Graimondii_physical
(Reference Set)
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Correspondences
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Maps Gr_Chr11
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 Feature Options
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr11
Map Start: 0 bp
Map Stop: 62,589,513 bp
Features by Type:
271 Marker Cotton
271 Total

Map Features

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Items 1 to 25 of 271.       of 11 | Next
Cotton - Graimondii_physical - Gr_Chr11
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
A1131 Marker Cotton 20,581,320 - 20,582,326 Cotton - PK - c20 A1131 Marker 77.6 (cM) Automated name-based View Maps
A1158 Marker Cotton 2,827,504 - 2,828,689 Cotton - Guazuncho2xVH8-BC1 - c10 A1158 Marker 2.9 (cM) Automated name-based View Maps
Cotton - PK - c10 A1158 Marker 38.7 (cM) Automated name-based View Maps
Cotton - PK - c20 A1158 Marker 30.1 (cM) Automated name-based View Maps
Cotton - GVc - 10 A1158 Marker 3 (cM) Automated name-based View Maps
A1163 Marker Cotton 4,047,503 - 4,049,287 Cotton - PK - c20 A1163 Marker 44 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 A1163 Marker 8.5 (cM) Automated name-based View Maps
Cotton - PK - c10 A1163 Marker 49.9 (cM) Automated name-based View Maps
Cotton - GVc - 10 A1163 Marker 9.4 (cM) Automated name-based View Maps
A1183 Marker Cotton 52,604,444 - 52,605,536 Cotton - PK - c10 A1183 Marker 131.4 (cM) Automated name-based View Maps
Cotton - PK - c10 A1183 Marker 130.4 (cM) Automated name-based View Maps
A1212 Marker Cotton 10,963,553 - 10,964,383 Cotton - Guazuncho2xVH8-BC1 - c20 A1212 Marker 113.6 (cM) Automated name-based View Maps
Cotton - GVc - 20 A1212 Marker 70.5 (cM) Automated name-based View Maps
Cotton - PK - c20 A1212 Marker 65.2 (cM) Automated name-based View Maps
A1286 Marker Cotton 7,071,746 - 7,072,098 Cotton - PK - c20 A1286 Marker 55.7 (cM) Automated name-based View Maps
A1344 Marker Cotton 4,298,427 - 4,298,979 Cotton - PK - c10 A1344 Marker 50.8 (cM) Automated name-based View Maps
A1461 Marker Cotton 7,088,450 - 7,089,426 Cotton - PK - c20 A1461 Marker 55.7 (cM) Automated name-based View Maps
A1468 Marker Cotton 2,518,318 - 2,519,204 Cotton - PK - c10 A1468 Marker 33.3 (cM) Automated name-based View Maps
A1695 Marker Cotton 39,506,433 - 39,507,590 Cotton - PK - c10 A1695 Marker 76.1 (cM) Automated name-based View Maps
Cotton - GVc - 20 A1695 Marker 98.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 A1695 Marker 161 (cM) Automated name-based View Maps
Cotton - PK - c20 A1695 Marker 87.6 (cM) Automated name-based View Maps
A1708 Marker Cotton 54,310,336 - 54,311,463 Cotton - PK - c10 A1708 Marker 137.3 (cM) Automated name-based View Maps
BNL0119 Marker Cotton 50,619,343 - 50,619,691 Cotton - T3 - 20 BNL0119 Marker 72.52 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL0119 Marker 80.1 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL0119 Marker 35.5 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL0119 Marker 69.7 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL0119 Marker 124.5 (cM) Automated name-based View Maps
BNL0169 Marker Cotton 52,767,986 - 52,768,276 Cotton - Guazuncho2xVH8-RIL - c20 BNL0169 Marker 67.21 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL0169 Marker 71.8 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL0169 Marker 77.49 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL0169 Marker 108.5 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL0169 Marker 77.1 (cM) Automated name-based View Maps
BNL1160 Marker Cotton 13,137,381 - 13,137,779 Cotton - Guazuncho2xVH8-BC1 - c10 BNL1160 Marker 32.9 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL1160 Marker 31.9 (cM) Automated name-based View Maps
BNL1379 Marker Cotton 33,964,941 - 33,965,354 Cotton - T3 - 3 BNL1379 Marker 75.31 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL1379 Marker 85.9 (cM) Automated name-based View Maps
BNL1665 Marker Cotton 28,647,035 - 28,647,452 Cotton - E3 - 10 BNL1665 Marker 112.5 (cM) Automated name-based View Maps
Cotton - CH - 10 BNL1665 Marker 25.2 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL1665 Marker 58.2 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL1665 Marker 74.31 (cM) Automated name-based View Maps
BNL2553 Marker Cotton 62,003,659 - 62,004,132 Cotton - PK - c20 BNL2553 Marker 145.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL2553 Marker 264.9 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL2553 Marker 113.3 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL2553 Marker 25.5 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL2553 Marker 159.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL2553 Marker 97.76 (cM) Automated name-based View Maps
BNL2570 Marker Cotton 8,916,820 - 8,917,341 Cotton - Guazuncho2xVH8-BC1 - c20 BNL2570 Marker 100.5 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL2570 Marker 86.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL2570 Marker 15.9 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL2570 Marker 110.7 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL2570 Marker 45.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL2570 Marker 36.71 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL2570 Marker 36.52 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL2570 Marker 56.3 (cM) Automated name-based View Maps
BNL2631 Marker Cotton 12,637,158 - 12,637,661 Cotton - TH - 10 BNL2631 Marker 54.1 (cM) Automated name-based View Maps
BNL2872 Marker Cotton 9,875,587 - 9,875,900 Cotton - E3 - 10 BNL2872 Marker 93.7 (cM) Automated name-based View Maps
Cotton - CH - 10 BNL2872 Marker 44.5 (cM) Automated name-based View Maps
BNL3379 Marker Cotton 22,477,737 - 22,478,419 Cotton - GVc - 20 BNL3379 Marker 86.5 (cM) Automated name-based View Maps
Cotton - PK - c20 BNL3379 Marker 77.6 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL3379 Marker 147.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL3379 Marker 49.75 (cM) Automated name-based View Maps
BNL3431 Marker Cotton 51,972,285 - 51,972,935 Cotton - Guazuncho2xVH8-BC2 - A03 BNL3431 Marker 102.4 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL3431 Marker 167.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c11 BNL3431 Marker 60.01 (cM) Automated name-based View Maps
Cotton - TH - 11 BNL3431 Marker 119.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL3431 Marker 176.8 (cM) Automated name-based View Maps
Cotton - CH - 11 BNL3431 Marker 48.3 (cM) Automated name-based View Maps
Cotton - PK - A03 BNL3431 Marker 145.9 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL3431 Marker 160 (cM) Automated name-based View Maps
BNL3563 Marker Cotton 51,975,551 - 51,976,086 Cotton - TH - 10 BNL3563 Marker 72.1 (cM) Automated name-based View Maps
Cotton - CH - 10 BNL3563 Marker 58.9 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL3563 Marker 45.48 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL3563 Marker 112.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL3563 Marker 130 (cM) Automated name-based View Maps
BNL3646 Marker Cotton 61,792,601 - 61,792,808 Cotton - T3 - 20 BNL3646 Marker 115.53 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL3646 Marker 158.5 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL3646 Marker 111.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL3646 Marker 96.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3646 Marker 263.6 (cM) Automated name-based View Maps
BNL3660 Marker Cotton 28,511,693 - 28,512,188 Cotton - CH - 20 BNL3660 Marker 54.2 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL3660 Marker 94.2 (cM) Automated name-based View Maps