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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cocoa-DR1xCatongo
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - DR1xCatongo [ View Map Set Info ]
Map Name: LG4
Map Start: 0.00 cM
Map Stop: 81.10 cM
Features by Type:
10 Marker
9 QTL
19 Total

Map Features

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Items 1 to 19 of 19.
Cocoa - DR1xCatongo - LG4
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AFLP_DxC13/8 Marker 81.10 No other positions
AFLP_DxC12/6 Marker 33.50 No other positions
AFLP_DxC52/3 Marker 27.90 No other positions
AFLP_DxC55/3 Marker 0.00 No other positions
CCG1419 Marker 62.60 Cocoa - test - LG4 CCG1419 Marker 53.50 (cM) Automated name-based View Maps
Cocoa - S52xCatongo - LG4 CCG1419 Marker 81.80 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG4 CCG1419 Marker 53.50 (cM) Automated name-based View Maps
gTcCIR136 Marker 50.80 Cocoa - S52xCatongo - LG4 gTcCIR136 Marker 53.00 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG4 gTcCIR136 Marker 43.10 (cM) Automated name-based View Maps
Cocoa - test - LG4 gTcCIR136 Marker 43.10 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG4 gTcCIR136 Marker 43.10 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc04 gTcCIR136 Marker 17,484,278.00 - 17,484,823.00 (bp) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG4 gTcCIR136 Marker 36.20 (cM) Automated name-based View Maps
Cocoa - IMC78xCatongo - LG4 gTcCIR136 Marker 44.10 (cM) Automated name-based View Maps
gTcCIR129 Marker 72.30 Cocoa - SSR_SNP_consensus_map - LG4 gTcCIR129 Marker 58.00 (cM) Automated name-based View Maps
Cocoa - IMC78xCatongo - LG4 gTcCIR129 Marker 65.40 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG4 gTcCIR129 Marker 64.10 (cM) Automated name-based View Maps
Cocoa - test - LG4 gTcCIR129 Marker 64.10 (cM) Automated name-based View Maps
Cocoa - S52xCatongo - LG4 gTcCIR129 Marker 87.80 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG4 gTcCIR129 Marker 64.10 (cM) Automated name-based View Maps
mTcCIR18 Marker 13.90 Cocoa - consensus_disease_res - LG4 mTcCIR18 Marker 18.70 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc04 mTcCIR18 Marker 8,532,821.00 - 8,533,219.00 (bp) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG4 mTcCIR18 Marker 18.70 (cM) Automated name-based View Maps
Cocoa - test - LG4 mTcCIR18 Marker 18.70 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG4 mTcCIR18 Marker 17.90 (cM) Automated name-based View Maps
Cocoa - S52xCatongo - LG4 mTcCIR18 Marker 23.80 (cM) Automated name-based View Maps
mTcCIR17 Marker 20.10 Cocoa - SSR_SNP_consensus_map - LG4 mTcCIR17 Marker 22.50 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG4 mTcCIR17 Marker 23.40 (cM) Automated name-based View Maps
Cocoa - test - LG4 mTcCIR17 Marker 23.40 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG4 mTcCIR17 Marker 23.40 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc04 mTcCIR17 Marker 11,965,860.00 - 11,966,697.00 (bp) Automated name-based View Maps
mTcCIR12 Marker 41.10 Cocoa - consensus_disease_res - LG4 mTcCIR12 Marker 35.90 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG4 mTcCIR12 Marker 35.90 (cM) Automated name-based View Maps
Cocoa - IMC78xCatongo - LG4 mTcCIR12 Marker 37.00 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG4 mTcCIR12 Marker 33.10 (cM) Automated name-based View Maps
Cocoa - test - LG4 mTcCIR12 Marker 35.90 (cM) Automated name-based View Maps
Cocoa - (Sca6xH)xC1 - LG4 mTcCIR12 Marker 27.50 (cM) Automated name-based View Maps
DxC_BLGa_lg4 QTL 0.00 - 14.00 No other positions
DxC_BLGb_lg4 QTL 62.00 - 81.00 No other positions
DxC_BSI_lg4 QTL 63.00 - 81.00 No other positions
DxC_OVN_lg4 QTL 51.00 - 72.00 No other positions
DxC_WBW_lg4 QTL 34.00 - 51.00 No other positions
DxC_PN_lg4 QTL 34.00 - 51.00 No other positions
DxC_PW_lg4 QTL 0.00 - 14.00 No other positions
DxC_RP_lg4 QTL 0.00 - 14.00 No other positions
DxC_TC_lg4 QTL 63.00 - 81.00 No other positions