CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cocoa-DR1xCatongo
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - DR1xCatongo [ View Map Set Info ]
Map Name: LG9
Map Start: 0.00 cM
Map Stop: 109.60 cM
Features by Type:
10 Marker
2 QTL
12 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
Cocoa - DR1xCatongo - LG9
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AFLP_DxC50/4 Marker 109.60 No other positions
AFLP_DxC55/5 Marker 33.60 No other positions
AFLP_DxC15/22 Marker 22.80 No other positions
AFLP_DxC32/4 Marker 6.10 No other positions
gTcCIRxxA Marker 45.70 Cocoa - S52xCatongo - LG9 gTcCIRxxA Marker 30.30 (cM) Automated name-based View Maps
gTcCIR109 Marker 0.00 Cocoa - Physical map - Tc09 gTcCIR109 Marker 1,089,593.00 - 1,089,854.00 (bp) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 gTcCIR109 Marker 9.00 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 gTcCIR109 Marker 9.00 (cM) Automated name-based View Maps
Cocoa - test - LG9 gTcCIR109 Marker 9.00 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 gTcCIR109 Marker 5.50 (cM) Automated name-based View Maps
cTcCIR228 Marker 78.60 Cocoa - test - LG9 cTcCIR228 Marker 53.70 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 cTcCIR228 Marker 53.70 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 cTcCIR228 Marker 53.70 (cM) Automated name-based View Maps
gTcCIR102 Marker 91.10 Cocoa - S52xCatongo - LG9 gTcCIR102 Marker 58.80 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 gTcCIR102 Marker 59.00 (cM) Automated name-based View Maps
Cocoa - test - LG9 gTcCIR102 Marker 59.00 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 gTcCIR102 Marker 59.00 (cM) Automated name-based View Maps
cTcCIR87 Marker 99.10 Cocoa - test - LG9 cTcCIR87 Marker 64.20 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 cTcCIR87 Marker 64.20 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 cTcCIR87 Marker 64.20 (cM) Automated name-based View Maps
mTcCIR8 Marker 62.00 Cocoa - (Sca6xH)xC1 - LG9 mTcCIR8 Marker 60.10 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR8 Marker 45.40 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR8 Marker 52.50 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 mTcCIR8 Marker 52.50 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR8 Marker 52.50 (cM) Automated name-based View Maps
DxC_WBW_lg9 QTL 75.00 - 91.00 No other positions
DxC_PN_lg9 QTL 75.00 - 91.00 No other positions