CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cocoa-S52xCatongo
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - S52xCatongo [ View Map Set Info ]
Map Name: LG3
Map Start: 0.00 cM
Map Stop: 64.30 cM
Features by Type:
7 Marker
1 QTL
8 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 8 of 8.
Cocoa - S52xCatongo - LG3
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
cTcCIR62 Marker 13.90 Cocoa - SSR_SNP_consensus_map - LG3 cTcCIR62 Marker 25.00 (cM) Automated name-based View Maps
Cocoa - test - LG3 cTcCIR62 Marker 24.60 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG3 cTcCIR62 Marker 24.60 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG3 cTcCIR62 Marker 24.60 (cM) Automated name-based View Maps
gTcCIR143 Marker 32.60 Cocoa - DR1xCatongo - LG3 gTcCIR143 Marker 43.50 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG3 gTcCIR143 Marker 40.90 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG3 gTcCIR143 Marker 44.00 (cM) Automated name-based View Maps
Cocoa - test - LG3 gTcCIR143 Marker 44.00 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc03 gTcCIR143 Marker 18,368,107.00 - 18,368,285.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG3 gTcCIR143 Marker 44.00 (cM) Automated name-based View Maps
gTcCIR118 Marker 64.30 Cocoa - consensus_disease_res - LG3 gTcCIR118 Marker 67.70 (cM) Automated name-based View Maps
Cocoa - test - LG3 gTcCIR118 Marker 67.70 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG3 gTcCIR118 Marker 67.70 (cM) Automated name-based View Maps
gTcCIR121 Marker 0.00 No other positions
AFLP_SxC52/7 Marker 6.40 No other positions
AFLP_SxC27/2 Marker 46.30 No other positions
AFLP_SxC52/6 Marker 50.80 No other positions
SxC_PW_lg3 QTL 42.00 - 51.00 No other positions