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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cocoa-TSH516
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Maps LG2
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Feature Types:
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Correspondence		 Always Display
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - TSH516 [ View Map Set Info ]
Map Name: LG2
Map Start: 0.00 cM
Map Stop: 99.60 cM
Features by Type:
23 Marker
23 Total

Map Features

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Items 1 to 23 of 23.
Cocoa - TSH516 - LG2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
mTcCIR269 Marker 99.60 Cocoa - test - LG2 mTcCIR269 Marker 75.70 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR269 Marker 75.70 (cM) Automated name-based View Maps
mTcCIR261 Marker 92.60 Cocoa - test - LG2 mTcCIR261 Marker 79.80 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR261 Marker 79.80 (cM) Automated name-based View Maps
W123 Marker 86.70 Cocoa - test - LG2 W123 Marker 89.00 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 W123 Marker 89.00 (cM) Automated name-based View Maps
SHRSTc2 Marker 50.50 No other positions
mTcCIR139 Marker 49.30 Cocoa - test - LG2 mTcCIR139 Marker 54.20 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR139 Marker 54.20 (cM) Automated name-based View Maps
SHRSTc13 Marker 38.00 No other positions
mTcCIR152 Marker 36.80 Cocoa - test - LG2 mTcCIR152 Marker 38.80 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR152 Marker 38.80 (cM) Automated name-based View Maps
SHRSTc6 Marker 23.90 No other positions
SHRSTc21 Marker 23.90 No other positions
mTcCIR60 Marker 47.70 Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR60 Marker 54.60 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR60 Marker 10,932,181.00 - 10,932,779.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR60 Marker 51.50 (cM) Automated name-based View Maps
Cocoa - test - LG2 mTcCIR60 Marker 51.50 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR60 Marker 51.50 (cM) Automated name-based View Maps
mTcCIR48 Marker 69.70 Cocoa - test - LG2 mTcCIR48 Marker 67.10 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR48 Marker 67.10 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR48 Marker 70.70 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR48 Marker 67.10 (cM) Automated name-based View Maps
mTcCIR19 Marker 5.10 Cocoa - IMC78xCatongo - LG2 mTcCIR19 Marker 0.00 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR19 Marker 8.70 (cM) Automated name-based View Maps
Cocoa - test - LG2 mTcCIR19 Marker 8.70 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR19 Marker 14.60 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR19 Marker 8.70 (cM) Automated name-based View Maps
Cocoa - DR1xCatongo - LG2 mTcCIR19 Marker 3.10 (cM) Automated name-based View Maps
mTcCIR3 Marker 16.40 Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR3 Marker 25.00 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR3 Marker 17.50 (cM) Automated name-based View Maps
Cocoa - test - LG2 mTcCIR3 Marker 17.50 (cM) Automated name-based View Maps
Cocoa - DR1xCatongo - LG2 mTcCIR3 Marker 15.10 (cM) Automated name-based View Maps
Cocoa - S52xCatongo - LG2 mTcCIR3 Marker 0.00 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR3 Marker 17.50 (cM) Automated name-based View Maps
Cocoa - (Sca6xH)xC1 - LG2 mTcCIR3 Marker 17.60 (cM) Automated name-based View Maps
mTcCIR268 Marker 36.80 Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR268 Marker 45.30 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR268 Marker 7,606,811.00 - 7,607,390.00 (bp) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR268 Marker 38.80 (cM) Automated name-based View Maps
Cocoa - test - LG2 mTcCIR268 Marker 38.80 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR268 Marker 38.80 (cM) Automated name-based View Maps
mTcCIR252 Marker 0.00 Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR252 Marker 8.00 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR252 Marker 2.50 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR252 Marker 712,221.00 - 712,428.00 (bp) Automated name-based View Maps
Cocoa - test - LG2 mTcCIR252 Marker 2.50 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR252 Marker 2.50 (cM) Automated name-based View Maps
mTcCIR240 Marker 9.20 Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR240 Marker 17.70 (cM) Automated name-based View Maps
Cocoa - test - LG2 mTcCIR240 Marker 11.50 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR240 Marker 11.50 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR240 Marker 11.50 (cM) Automated name-based View Maps
mTcCIR230 Marker 84.10 Cocoa - test - LG2 mTcCIR230 Marker 84.30 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR230 Marker 84.30 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR230 Marker 84.30 (cM) Automated name-based View Maps
mTcCIR228 Marker 84.80 Cocoa - ref_UPA402xUF676 - LG2 mTcCIR228 Marker 87.20 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR228 Marker 87.20 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR228 Marker 90.90 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR228 Marker 26,252,963.00 - 26,253,241.00 (bp) Automated name-based View Maps
Cocoa - test - LG2 mTcCIR228 Marker 87.20 (cM) Automated name-based View Maps
mTcCIR165 Marker 49.30 Cocoa - test - LG2 mTcCIR165 Marker 54.20 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR165 Marker 54.20 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR165 Marker 14,820,025.00 - 14,820,530.00 (bp) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR165 Marker 54.20 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR165 Marker 58.00 (cM) Automated name-based View Maps
mTcCIR162 Marker 56.90 Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR162 Marker 65.10 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR162 Marker 19,241,845.00 - 19,242,455.00 (bp) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR162 Marker 60.80 (cM) Automated name-based View Maps
Cocoa - test - LG2 mTcCIR162 Marker 60.80 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR162 Marker 60.80 (cM) Automated name-based View Maps
mTcCIR129 Marker 23.50 Cocoa - test - LG2 mTcCIR129 Marker 19.70 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR129 Marker 27.00 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG2 mTcCIR129 Marker 19.70 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR129 Marker 19.70 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR129 Marker 4,568,896.00 - 4,569,242.00 (bp) Automated name-based View Maps
mTcCIR73 Marker 99.60 Cocoa - ref_UPA402xUF676 - LG2 mTcCIR73 Marker 94.90 (cM) Automated name-based View Maps
Cocoa - test - LG2 mTcCIR73 Marker 94.90 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR73 Marker 96.10 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR73 Marker 94.90 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR73 Marker 27,352,085.00 - 27,352,439.00 (bp) Automated name-based View Maps
mTcCIR68 Marker 92.60 Cocoa - ref_UPA402xUF676 - LG2 mTcCIR68 Marker 92.80 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR68 Marker 26,854,246.00 - 26,854,833.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR68 Marker 92.80 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR68 Marker 94.10 (cM) Automated name-based View Maps
Cocoa - test - LG2 mTcCIR68 Marker 92.80 (cM) Automated name-based View Maps