CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps D02
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: D02
Map Start: 0 cM
Map Stop: 191.1 cM
Features by Type:
133 Marker
15 QTL
148 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 148.       Previous | of 6 | Next
Cotton - PK - D02
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PAR07E12 Marker 98.4 Cotton - Graimondii_physical - Gr_Chr07 pAR07E12 Marker Cotton 17,026,813 - 17,027,295 (bp) Automated name-based View Maps
Cotton - HDC - 21 pAR07E12 Marker 108.8 (cM) Automated name-based View Maps
pAR044 Marker 5.2 Cotton - GVc - 11 pAR044 Marker 20 (cM) Automated name-based View Maps
Cotton - HDC - 21 pAR044 Marker 147.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 pAR044 Marker 20.6 (cM) Automated name-based View Maps
Cotton - HDC - 11 pAR044 Marker 200.2 (cM) Automated name-based View Maps
pAR038 Marker 81.5 Cotton - Guazuncho2xVH8-BC1 - D02 pAR038 Marker 117.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 pAR038 Marker Cotton 25,626,530 - 25,627,302 (bp) Automated name-based View Maps
Cotton - GVc - 21 pAR038 Marker 81.2 (cM) Automated name-based View Maps
Cotton - HDC - 21 pAR038 Marker 121.5 (cM) Automated name-based View Maps
pAR003 Marker 62.4 Cotton - HDC - 21 pAR003 Marker 126.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR003 Marker Cotton 38,997,465 - 38,998,199 (bp) Automated name-based View Maps
P10_56 Marker 141.8 Cotton - PK - D03 P10_56 Marker 116.4 (cM) Automated name-based View Maps
Cotton - HDC - 21 P10_56 Marker 82 (cM) Automated name-based View Maps
Cotton - HDC - 24 P10_56 Marker 106.5 (cM) Automated name-based View Maps
P07_04 Marker 136.1 Cotton - HDC - 21 P07_04 Marker 84.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 P07_04 Marker 143.1 (cM) Automated name-based View Maps
Cotton - PK - D03 P07_04 Marker 150.4 (cM) Automated name-based View Maps
P02_45 Marker 184 Cotton - Graimondii_physical - Gr_Chr09 P02_45 Marker Cotton 7,638,085 - 7,638,717 (bp) Automated name-based View Maps
Cotton - GVc - 21 P02_45 Marker 176.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 P02_45 Marker 277.5 (cM) Automated name-based View Maps
Cotton - HDC - 21 P02_45 Marker 46 (cM) Automated name-based View Maps
NBS008 Marker 0 Cotton - PK - A03 NBS008 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 21 NBS008 Marker 150.7 (cM) Automated name-based View Maps
Cotton - HDC - 11 NBS008 Marker 145.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 NBS008 Marker Cotton 58,718,441 - 58,718,942 (bp) Automated name-based View Maps
Cotton - PK - A03 NBS008 Marker 59.2 (cM) Automated name-based View Maps
Cotton - HDC - 11 NBS008 Marker 195.3 (cM) Automated name-based View Maps
M16_091 Marker 140 Cotton - HDC - 21 M16_091 Marker 82.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 M16_091 Marker Cotton 55,188,521 - 55,189,884 (bp) Automated name-based View Maps
Gate3BB09 Marker 15.2 Cotton - HDC - 21 Gate3BB09 Marker 143.1 (cM) Automated name-based View Maps
Gate2DC04 Marker 70.9 Cotton - HDC - 21 Gate2DC04 Marker 122.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gate2DC04 Marker Cotton 61,262,794 - 61,263,492 (bp) Automated name-based View Maps
A1316 Marker 11.7 Cotton - HDC - 21 A1316 Marker 144.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 A1316 Marker Cotton 55,532,744 - 55,533,886 (bp) Automated name-based View Maps
pGH767 Marker 6.1 Cotton - HDC - 21 pGH767 Marker 147.2 (cM) Automated name-based View Maps
A1400 Marker 100 Cotton - Graimondii_physical - Gr_Chr07 A1400 Marker Cotton 15,357,459 - 15,358,529 (bp) Automated name-based View Maps
Cotton - HDC - 21 A1400 Marker 107.6 (cM) Automated name-based View Maps
pGH854 Marker 65.1 Cotton - Graimondii_physical - Gr_Chr11 pGH854 Marker Cotton 60,838,543 - 60,839,476 (bp) Automated name-based View Maps
Cotton - HDC - 21 pGH854 Marker 125.8 (cM) Automated name-based View Maps
A1531 Marker 167.3 Cotton - Graimondii_physical - Gr_Chr07 A1531 Marker Cotton 3,587,134 - 3,587,670 (bp) Automated name-based View Maps
Cotton - HDC - 21 A1531 Marker 69.5 (cM) Automated name-based View Maps
pVNC180 Marker 40.1 Cotton - HDC - 21 pVNC180 Marker 134.4 (cM) Automated name-based View Maps
Cotton - PK - A03 pVNC180 Marker 41.9 (cM) Automated name-based View Maps
Cotton - HDC - 11 pVNC180 Marker 160 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 pVNC180 Marker Cotton 50,692,575 - 50,692,798 (bp) Automated name-based View Maps
A1684 Marker 128 Cotton - Graimondii_physical - Gr_Chr07 A1684 Marker Cotton 10,887,475 - 10,888,401 (bp) Automated name-based View Maps
Cotton - HDC - 21 A1684 Marker 89.6 (cM) Automated name-based View Maps
PXP3_26 Marker 65.1 Cotton - HDC - 13 pXP3_26 Marker 55.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 pXP3_26 Marker 109.5 (cM) Automated name-based View Maps
Cotton - HDC - 21 pXP3_26 Marker 124.2 (cM) Automated name-based View Maps
Cotton - HDC - 21 pXP3_26 Marker 125.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 pXP3_26 Marker Cotton 6,852,467 - 6,853,249 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 pXP3_26 Marker 152.5 (cM) Automated name-based View Maps
Cotton - GVc - 13 pXP3_26 Marker 97.2 (cM) Automated name-based View Maps
Cotton - GVc - 21 pXP3_26 Marker 73.1 (cM) Automated name-based View Maps
BNL1231 Marker 10.6 Cotton - T3 - 11 BNL1231 Marker 140.86 (cM) Automated name-based View Maps
Cotton - PK - A03 BNL1231 Marker 13.1 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL1231 Marker 30.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 BNL1231 Marker Cotton 57,124,940 - 57,125,230 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 BNL1231 Marker 31.3 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL1231 Marker 183.9 (cM) Automated name-based View Maps
Cotton - T3 - 21 BNL1231 Marker 113.36 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL1231 Marker 144.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D02 BNL1231 Marker 10.1 (cM) Automated name-based View Maps
Cotton - GVc - 21 BNL1231 Marker 29 (cM) Automated name-based View Maps
Cotton - TH - 11 BNL1231 Marker 0 (cM) Automated name-based View Maps
Unig06E08 Marker 141.8 Cotton - HDC - 21 Unig06E08 Marker 82 (cM) Automated name-based View Maps
Cotton - HDC - 11 Unig06E08 Marker 51 (cM) Automated name-based View Maps
Cotton - PK - A03 Unig06E08 Marker 159.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Unig06E08 Marker Cotton 6,202,061 - 6,202,774 (bp) Automated name-based View Maps
BNL3171 Marker 134.4 Cotton - HDC - 21 BNL3171 Marker 85.6 (cM) Automated name-based View Maps
Cotton - TH - 21 BNL3171 Marker 141.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D02 BNL3171 Marker 128.5 (cM) Automated name-based View Maps
Cotton - E3 - 21 BNL3171 Marker 182.9 (cM) Automated name-based View Maps
Cotton - T3 - 21 BNL3171 Marker 53.15 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 BNL3171 Marker 195.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 BNL3171 Marker Cotton 8,205,715 - 8,206,217 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 BNL3171 Marker 130.21 (cM) Automated name-based View Maps
Cotton - GVc - 21 BNL3171 Marker 123.3 (cM) Automated name-based View Maps
Cotton - CH - 21 BNL3171 Marker 38.8 (cM) Automated name-based View Maps
Unig22F12 Marker 11.7 Cotton - PK - c18 Unig22F12 Marker 50.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Unig22F12 Marker Cotton 47,146,396 - 47,147,035 (bp) Automated name-based View Maps
Cotton - HDC - 21 Unig22F12 Marker 144.3 (cM) Automated name-based View Maps
Cotton - HDC - 18 Unig22F12 Marker 69.9 (cM) Automated name-based View Maps
CMS46 Marker 78.6 Cotton - HDC - 21 CMS46 Marker 121.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 CMS46 Marker Cotton 25,811,812 - 25,812,331 (bp) Automated name-based View Maps
Unig22H11 Marker 11.7 Cotton - PK - c12 Unig22H11 Marker 56.3 (cM) Automated name-based View Maps
Cotton - HDC - 11 Unig22H11 Marker 182.1 (cM) Automated name-based View Maps
Cotton - HDC - 12 Unig22H11 Marker 66 (cM) Automated name-based View Maps
Cotton - HDC - 21 Unig22H11 Marker 144.3 (cM) Automated name-based View Maps
Cotton - PK - A03 Unig22H11 Marker 15.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Unig22H11 Marker Cotton 47,178,176 - 47,178,840 (bp) Automated name-based View Maps