CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c4
Map Start: 0 cM
Map Stop: 186.1 cM
Features by Type:
99 Marker
7 QTL
106 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 106.       Previous | of 5 | Next
Cotton - PK - c4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gate2BF01 Marker 108.9 Cotton - HDC - 4 Gate2BF01 Marker 59.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Gate2BF01 Marker Cotton 54,262,791 - 54,263,466 (bp) Automated name-based View Maps
Gate2AD01 Marker 164.8 Cotton - HDC - 4 Gate2AD01 Marker 45 (cM) Automated name-based View Maps
Gate1DC01 Marker 105.4 Cotton - HDC - 4 Gate1DC01 Marker 60.2 (cM) Automated name-based View Maps
Gate1BB01 Marker 76.3 Cotton - HDC - 4 Gate1BB01 Marker 66.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gate1BB01 Marker Cotton 30,559,693 - 30,560,387 (bp) Automated name-based View Maps
Gafb14K15 Marker 93.9 Cotton - HDC - 4 Gafb14K15 Marker 63.2 (cM) Automated name-based View Maps
Cotton - HDC - 15 Gafb14K15 Marker 13.9 (cM) Automated name-based View Maps
Cotton - PK - c15 Gafb14K15 Marker 10.6 (cM) Automated name-based View Maps
Gate1AG03 Marker 55.7 Cotton - HDC - 4 Gate1AG03 Marker 86.6 (cM) Automated name-based View Maps
Cotton - HDC - 4 Gate1AG03 Marker 69.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gate1AG03 Marker Cotton 32,537,133 - 32,537,604 (bp) Automated name-based View Maps
G1033 Marker 102.7 Cotton - Graimondii_physical - Gr_Chr12 G1033 Marker Cotton 26,022,768 - 26,023,024 (bp) Automated name-based View Maps
Cotton - HDC - 4 G1033 Marker 60.9 (cM) Automated name-based View Maps
Coau2K12 Marker 126.1 Cotton - HDC - 4 Coau2K12 Marker 54.9 (cM) Automated name-based View Maps
Coau2I05 Marker 97.3 Cotton - HDC - 2 Coau2I05 Marker 110.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Coau2I05 Marker Cotton 24,460,324 - 24,460,933 (bp) Automated name-based View Maps
Cotton - PK - c2 Coau2I05 Marker 26 (cM) Automated name-based View Maps
Cotton - HDC - 4 Coau2I05 Marker 62.3 (cM) Automated name-based View Maps
BNL0625 Marker 22.5 Cotton - Graimondii_physical - Gr_Chr07 BNL0625 Marker Cotton 28,319,538 - 28,319,828 (bp) Automated name-based View Maps
Cotton - TH - 11 BNL0625 Marker 76.1 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL0625 Marker 137.2 (cM) Automated name-based View Maps
Cotton - CH - 11 BNL0625 Marker 119.3 (cM) Automated name-based View Maps
Cotton - PK - A03 BNL0625 Marker 156 (cM) Automated name-based View Maps
Cotton - PK - A03 BNL0625 Marker 69.4 (cM) Automated name-based View Maps
Cotton - T3 - 11 BNL0625 Marker 99.78 (cM) Automated name-based View Maps
Cotton - TH - 11 BNL0625 Marker 81.7 (cM) Automated name-based View Maps
Cotton - PK - c12 BNL0625 Marker 83.8 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL0625 Marker 98.3 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL0625 Marker 86.8 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL0625 Marker 130.2 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL0625 Marker 56.3 (cM) Automated name-based View Maps
Coau1J18 Marker 166.7 Cotton - Graimondii_physical - Gr_Chr06 Coau1J18 Marker Cotton 45,430,711 - 45,431,316 (bp) Automated name-based View Maps
Cotton - HDC - 4 Coau1J18 Marker 44.5 (cM) Automated name-based View Maps
A1759 Marker 135.7 Cotton - HDC - 21 A1759 Marker 79 (cM) Automated name-based View Maps
Cotton - HDC - 4 A1759 Marker 52.4 (cM) Automated name-based View Maps
Cotton - PK - D02 A1759 Marker 148 (cM) Automated name-based View Maps
A1717 Marker 138.2 Cotton - PK - A03 A1717 Marker 104.2 (cM) Automated name-based View Maps
Cotton - HDC - 4 A1717 Marker 51.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 A1717 Marker Cotton 17,618,300 - 17,619,318 (bp) Automated name-based View Maps
Cotton - HDC - 11 A1717 Marker 111.1 (cM) Automated name-based View Maps
A1638 Marker 108 Cotton - HDC - 4 A1638 Marker 59.5 (cM) Automated name-based View Maps
A1310 Marker 132.3 Cotton - HDC - 12 A1310 Marker 96.6 (cM) Automated name-based View Maps
Cotton - PK - c26 A1310 Marker 35.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 A1310 Marker Cotton 53,685,800 - 53,687,481 (bp) Automated name-based View Maps
Cotton - HDC - 4 A1310 Marker 53.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 A1310 Marker 29.4 (cM) Automated name-based View Maps
Cotton - HDC - 26 A1310 Marker 119.8 (cM) Automated name-based View Maps
Cotton - GVc - 12 A1310 Marker 25.8 (cM) Automated name-based View Maps
A1543 Marker 108.9 Cotton - Graimondii_physical - Gr_Chr09 A1543 Marker Cotton 47,355,415 - 47,356,313 (bp) Automated name-based View Maps
Cotton - HDC - 4 A1543 Marker 59.8 (cM) Automated name-based View Maps
Cotton - HDC - 4 A1543 Marker 59.3 (cM) Automated name-based View Maps
A1172 Marker 92.9 Cotton - Guazuncho2xVH8-BC1 - c4 A1172 Marker 74 (cM) Automated name-based View Maps
Cotton - HDC - 4 A1172 Marker 63.4 (cM) Automated name-based View Maps
Cotton - GVc - 4 A1172 Marker 29.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 A1172 Marker Cotton 27,208,472 - 27,209,175 (bp) Automated name-based View Maps
W15 Marker 19.1 Cotton - Graimondii_physical - Gr_Chr05 W15 Marker Cotton 63,926,196 - 63,926,847 (bp) Automated name-based View Maps
Cotton - HDC - 4 W15 Marker 82.4 (cM) Automated name-based View Maps
Unig28D06 Marker 22.5 Cotton - HDC - 4 Unig28D06 Marker 81.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Unig28D06 Marker Cotton 34,316,238 - 34,316,892 (bp) Automated name-based View Maps
Cotton - HDC - 4 Unig28D06 Marker 82.4 (cM) Automated name-based View Maps
Unig27B06 Marker 105.4 Cotton - HDC - 4 Unig27B06 Marker 60.2 (cM) Automated name-based View Maps
Cotton - HDC - 4 Unig27B06 Marker 62.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig27B06 Marker Cotton 46,366,198 - 46,366,864 (bp) Automated name-based View Maps
Unig28C06 Marker 105.4 Cotton - HDC - 4 Unig28C06 Marker 60.2 (cM) Automated name-based View Maps
Unig26D09 Marker 107.2 Cotton - HDC - 4 Unig26D09 Marker 59.8 (cM) Automated name-based View Maps
Unig25D03 Marker 109.9 Cotton - HDC - 4 Unig25D03 Marker 59.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig25D03 Marker Cotton 64,167,838 - 64,168,467 (bp) Automated name-based View Maps
Unig22D08 Marker 90.5 Cotton - HDC - 4 Unig22D08 Marker 63.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Unig22D08 Marker Cotton 29,470,352 - 29,470,993 (bp) Automated name-based View Maps
Unig23G08 Marker 150 Cotton - HDC - 4 Unig23G08 Marker 48.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig23G08 Marker Cotton 68,316,304 - 68,316,953 (bp) Automated name-based View Maps