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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-T3
(Reference Set) 		Cotton-CH
Min.
Correspondences
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Stack
Maps 8 8
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 8
Map Start: 0 cM
Map Stop: 139.99 cM
Features by Type:
94 Marker
94 Total

Map Features

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Items 76 to 94 of 94.       Previous | of 4
Cotton - T3 - 8
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL3474 Marker 57.66 Cotton - Guazuncho2xVH8-BC1 - A02 BNL3474 Marker 170.6 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3474 Marker 118.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL3474 Marker Cotton 38,654,033 - 38,654,647 (bp) Automated name-based View Maps
Cotton - HDC - 8 BNL3474 Marker 102.6 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL3474 Marker 118.8 (cM) Automated name-based View Maps
Cotton - TH - 24 BNL3474 Marker 85 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL3474 Marker 75.9 (cM) Automated name-based View Maps
Cotton - TH - 8 BNL3474 Marker 81.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL3474 Marker 110.6 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL3474 Marker 104.4 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL3474 Marker 87.8 (cM) Automated name-based View Maps
Cotton - TH - 24 BNL3474 Marker 97.7 (cM) Automated name-based View Maps
MUSB0662 Marker 58.6 Cotton - E3 - 8 MUSB0662 Marker 35.7 (cM) Automated name-based View Maps
Cotton - HDC - 8 MUSB0662 Marker 101.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 MUSB0662 Marker Cotton 31,338,419 - 31,339,465 (bp) Automated name-based View Maps
Gh532 Marker 59.97 Cotton - E3 - 8 Gh532 Marker 41.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Gh532 Marker Cotton 18,324,864 - 18,325,571 (bp) Automated name-based View Maps
Cotton - HDC - 8 Gh532 Marker 100.8 (cM) Automated name-based View Maps
MUSB0073 Marker 61.12 Cotton - HDC - 8 MUSB0073 Marker 99.9 (cM) Automated name-based View Maps
Cotton - HDC - 17 MUSB0073 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 17 MUSB0073 Marker 114.6 (cM) Automated name-based View Maps
MUSB1188 Marker 62.23 Cotton - HDC - 10 MUSB1188 Marker 109.4 (cM) Automated name-based View Maps
Cotton - HDC - 11 MUSB1188 Marker 132.7 (cM) Automated name-based View Maps
Cotton - T3 - 6 MUSB1188 Marker 57.59 (cM) Automated name-based View Maps
Cotton - HDC - 8 MUSB1188 Marker 99 (cM) Automated name-based View Maps
Cotton - HDC - 13 MUSB1188 Marker 52.1 (cM) Automated name-based View Maps
Cotton - T3 - 11 MUSB1188 Marker 92.62 (cM) Automated name-based View Maps
Cotton - T3 - 10 MUSB1188 Marker 83.66 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 MUSB1188 Marker Cotton 34,323,897 - 34,324,282 (bp) Automated name-based View Maps
Cotton - HDC - 6 MUSB1188 Marker 89.3 (cM) Automated name-based View Maps
Cotton - T3 - 13 MUSB1188 Marker 59.24 (cM) Automated name-based View Maps
Gh634 Marker 65.57 Cotton - HDC - 8 CLU343 Marker 96.4 (cM) Automated name-based View Maps
Cotton - E3 - 8 Gh634 Marker 52 (cM) Automated name-based View Maps
UCcot10030_1469 Marker 67.17 Cotton - HDC - 8 UCcot10030_1469 Marker 95.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 UCcot10030_1469 Marker Cotton 44,491,003 - 44,491,105 (bp) Automated name-based View Maps
TMB1639 Marker 68.11 Cotton - HDC - 8 TMB1639 Marker 94.4 (cM) Automated name-based View Maps
Cotton - T3 - 24 TMB1639 Marker 45.16 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 TMB1639 Marker Cotton 45,854,758 - 45,855,283 (bp) Automated name-based View Maps
Cotton - E3 - 24 TMB1639 Marker 43.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 TMB1639 Marker 86.5 (cM) Automated name-based View Maps
TMB2107 Marker 69.4 Cotton - Graimondii_physical - Gr_Chr04 TMB2107 Marker Cotton 46,428,183 - 46,428,769 (bp) Automated name-based View Maps
Cotton - E3 - 8 TMB2107 Marker 64.4 (cM) Automated name-based View Maps
Cotton - HDC - 8 TMB2107 Marker 93.3 (cM) Automated name-based View Maps
UCcg11373_298 Marker 70.24 Cotton - HDC - 8 UCcg11373_298 Marker 92.7 (cM) Automated name-based View Maps
MUSB0780 Marker 71.42 Cotton - Graimondii_physical - Gr_Chr04 MUSB0780 Marker Cotton 47,899,248 - 47,900,296 (bp) Automated name-based View Maps
Cotton - HDC - 8 MUSB0780 Marker 91.8 (cM) Automated name-based View Maps
UCcg10647_155 Marker 72.56 Cotton - HDC - 8 UCcg10647_155 Marker 90.8 (cM) Automated name-based View Maps
DPL0861 Marker 73.04 Cotton - Graimondii_physical - Gr_Chr04 DPL0861 Marker Cotton 48,699,935 - 48,700,686 (bp) Automated name-based View Maps
Cotton - HDC - 8 DPL0861 Marker 90.4 (cM) Automated name-based View Maps
MUSS130 Marker 73.79 Cotton - HDC - 8 CLU2331 Marker 89.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU2331 Marker 56 (cM) Automated name-based View Maps
UCcg10647_235 Marker 74.17 Cotton - HDC - 8 UCcg10647_235 Marker 88.7 (cM) Automated name-based View Maps
UCcg10265_340 Marker 75.25 Cotton - HDC - 8 UCcg10265_340 Marker 85.5 (cM) Automated name-based View Maps
DPL0031 Marker 75.32 Cotton - Graimondii_physical - Gr_Chr04 DPL0031 Marker Cotton 503,649 - 504,333 (bp) Automated name-based View Maps
Cotton - T3 - 24 DPL0031 Marker 53.95 (cM) Automated name-based View Maps
Cotton - HDC - 24 DPL0031 Marker 78.4 (cM) Automated name-based View Maps
Cotton - HDC - 8 DPL0031 Marker 84.3 (cM) Automated name-based View Maps
UCcg10265_529 Marker 75.33 Cotton - HDC - 8 UCcg10265_529 Marker 84.3 (cM) Automated name-based View Maps
UCcg11108_240 Marker 75.93 Cotton - HDC - 8 UCcg11108_240 Marker 83.7 (cM) Automated name-based View Maps