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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-TH
(Reference Set) 		Cotton-E3
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Correspondences
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Maps 24 24
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 24
Map Start: 0 cM
Map Stop: 166 cM
Features by Type:
105 Marker
105 Total

Map Features

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Items 26 to 50 of 105.       Previous | of 5 | Next
Cotton - TH - 24
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU1322 Marker 90.5 Cotton - HDC - 8 CLU1290 Marker 106.1 (cM) Automated name-based View Maps
Cotton - T3 - 8 NAU1322 Marker 51.18 (cM) Automated name-based View Maps
Cotton - T3 - 24 NAU1322 Marker 28 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU1290 Marker 102.3 (cM) Automated name-based View Maps
NAU2619 Marker 90.7 Cotton - HDC - 24 NAU2619 Marker 102.8 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU2619 Marker 30 (cM) Automated name-based View Maps
NAU6616 Marker 90.8 Cotton - E3 - 24 NAU6616 Marker 23.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU6616 Marker 103.1 (cM) Automated name-based View Maps
BNL2655 Marker 91 Cotton - HDC - 24 BNL2655 Marker 103.7 (cM) Automated name-based View Maps
Cotton - E3 - 24 BNL2655 Marker 33 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL2655 Marker 119.1 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL2655 Marker 75.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL2655 Marker 110.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL2655 Marker Cotton 37,477,437 - 37,477,712 (bp) Automated name-based View Maps
Cotton - T3 - 24 BNL2655 Marker 26.57 (cM) Automated name-based View Maps
NAU3207 Marker 91.2 Cotton - E3 - 8 NAU3207 Marker 37.3 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU3207 Marker 71.7 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU2116 Marker 103.7 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU3207 Marker 30.6 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU2116 Marker 94.5 (cM) Automated name-based View Maps
TMA5-180 Marker 91.4 Cotton - HDC - 24 TMA5-180 Marker 103.7 (cM) Automated name-based View Maps
BNL2499 Marker 91.7 Cotton - GVc - 24 BNL2499 Marker 75 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL2499 Marker 103.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL2499 Marker 110.6 (cM) Automated name-based View Maps
Cotton - T3 - 24 BNL2499 Marker 26.87 (cM) Automated name-based View Maps
Cotton - E3 - 24 BNL2499 Marker 33.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL2499 Marker Cotton 38,327,810 - 38,328,406 (bp) Automated name-based View Maps
em1DC1-205 Marker 92 Cotton - HDC - 24 em1DC1-205 Marker 103.8 (cM) Automated name-based View Maps
NAU2926 Marker 92.3 Cotton - Graimondii_physical - Gr_Chr04 NAU2926 Marker Cotton 11,460,015 - 11,460,868 (bp) Automated name-based View Maps
Cotton - HDC - 24 NAU2926 Marker 103.8 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU2926 Marker 27.8 (cM) Automated name-based View Maps
GW34-305 Marker 92.4 Cotton - HDC - 24 GW34-305 Marker 103.8 (cM) Automated name-based View Maps
NAU6488 Marker 92.7 Cotton - HDC - 24 NAU6488 Marker 103.9 (cM) Automated name-based View Maps
NAU6169 Marker 93.1 Cotton - HDC - 24 NAU6169 Marker 103.9 (cM) Automated name-based View Maps
NAU3769 Marker 93.9 Cotton - HDC - 24 NAU3769 Marker 104 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU3769 Marker 72.6 (cM) Automated name-based View Maps
Cotton - HDC - 8 NAU3769 Marker 95.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU3769 Marker Cotton 8,199,479 - 8,200,303 (bp) Automated name-based View Maps
Cotton - E3 - 8 NAU3769 Marker 27.2 (cM) Automated name-based View Maps
NAU2829 Marker 93.9 Cotton - HDC - 24 CLU4137 Marker 104 (cM) Automated name-based View Maps
NAU5379 Marker 94.3 Cotton - HDC - 24 CLU1261 Marker 104 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU1261 Marker 123.9 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU5379 Marker 13.6 (cM) Automated name-based View Maps
NAU5335 Marker 94.6 Cotton - HDC - 24 NAU5335 Marker 104.1 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU5335 Marker 0 (cM) Automated name-based View Maps
EM1OD26-500 Marker 95 Cotton - HDC - 24 EM1OD26-500 Marker 104.1 (cM) Automated name-based View Maps
NAU6389 Marker 95.4 Cotton - HDC - 24 NAU6389 Marker 104.2 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU6389 Marker 24.8 (cM) Automated name-based View Maps
GW17-350 Marker 96 Cotton - HDC - 24 GW17-350 Marker 104.2 (cM) Automated name-based View Maps
NAU1088 Marker 96.8 Cotton - HDC - 24 CLU3611 Marker 104.3 (cM) Automated name-based View Maps
BNL3474 Marker 97.7 Cotton - Graimondii_physical - Gr_Chr04 BNL3474 Marker Cotton 38,654,033 - 38,654,647 (bp) Automated name-based View Maps
Cotton - HDC - 24 BNL3474 Marker 104.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 BNL3474 Marker 170.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL3474 Marker 110.6 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL3474 Marker 57.66 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL3474 Marker 75.9 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3474 Marker 118.3 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL3474 Marker 118.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL3474 Marker 87.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL3474 Marker 102.6 (cM) Automated name-based View Maps
Cotton - TH - 8 BNL3474 Marker 81.9 (cM) Automated name-based View Maps
JESPR127 Marker 98.7 Cotton - E3 - 24 JESPR127 Marker 28.4 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU365 Marker 111.8 (cM) Automated name-based View Maps
BNL0252 Marker 99.9 Cotton - CH - 24 BNL0252 Marker 114.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL252 Marker 121.7 (cM) Automated name-based View Maps
Cotton - E3 - 24 BNL0252 Marker 20.9 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL0252 Marker 86.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL0252 Marker 72.51 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL0252 Marker 118 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL0252 Marker Cotton 6,735,697 - 6,736,043 (bp) Automated name-based View Maps
Cotton - T3 - 24 BNL0252 Marker 11.71 (cM) Automated name-based View Maps
BNL2597 Marker 0 Cotton - HDC - 24 BNL2597 Marker 4.6 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL2597 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL2597 Marker 0 (cM) Automated name-based View Maps
NAU3667 Marker 101.1 Cotton - Graimondii_physical - Gr_Chr04 NAU3667 Marker Cotton 6,082,506 - 6,082,940 (bp) Automated name-based View Maps
Cotton - E3 - 24 NAU3667 Marker 16.3 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU3667 Marker 118.5 (cM) Automated name-based View Maps