CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Graimondii_physical
(Reference Set)
Cotton-GVc
Min.
Correspondences
Align Vertically
Stack
Maps Gr_Chr02 15
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
Marker Cotton
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr02
Map Start: 0 bp
Map Stop: 62,737,583 bp
Features by Type:
258 Marker Cotton
258 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 76 to 100 of 258.       Previous | of 11 | Next
Cotton - Graimondii_physical - Gr_Chr02
(Click headers to resort)
Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
pAR132 Marker Cotton 7,337,351 - 7,338,161 Cotton - PK - c1 pAR132 Marker 144.3 (cM) Automated name-based View Maps
pAR121 Marker Cotton 60,385,661 - 60,386,030 Cotton - PK - c1 pAR121 Marker 35.7 (cM) Automated name-based View Maps
pAR09B07 Marker Cotton 59,534,342 - 59,535,113 Cotton - PK - D08 PAR09B07 Marker 85.9 (cM) Automated name-based View Maps
pAR077 Marker Cotton 2,995,621 - 2,996,647 Cotton - GVc - 15 pAR077 Marker 117.3 (cM) Automated name-based View Maps
Cotton - GVc - 1 pAR077 Marker 128.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 pAR077 Marker 215.7 (cM) Automated name-based View Maps
Cotton - PK - c15 pAR077 Marker 96.7 (cM) Automated name-based View Maps
Cotton - PK - c1 pAR077 Marker 142.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 pAR077 Marker 158.5 (cM) Automated name-based View Maps
pAR06F11 Marker Cotton 62,279,659 - 62,279,939 Cotton - PK - c1 pAR06F11 Marker 2.7 (cM) Automated name-based View Maps
pAR056 Marker Cotton 42,676,769 - 42,677,565 Cotton - PK - c14 pAR056 Marker 75.6 (cM) Automated name-based View Maps
pAR03C01 Marker Cotton 1,996,580 - 1,997,331 Cotton - PK - c26 PAR03C01 Marker 147 (cM) Automated name-based View Maps
pAR019 Marker Cotton 56,876,313 - 56,876,882 Cotton - GVc - 15 pAR019 Marker 39.1 (cM) Automated name-based View Maps
Cotton - GVc - 1 pAR019 Marker 26.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 pAR019 Marker 86.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 pAR019 Marker 44.8 (cM) Automated name-based View Maps
Cotton - PK - c15 pAR019 Marker 46.7 (cM) Automated name-based View Maps
P05_32 Marker Cotton 62,434,894 - 62,435,273 Cotton - PK - c15 P05_32 Marker 78.5 (cM) Automated name-based View Maps
Cotton - PK - c2 P05_32 Marker 19.3 (cM) Automated name-based View Maps
NAU5402 Marker Cotton 28,749,942 - 28,750,763 Cotton - TH - 15 NAU5402 Marker 60.5 (cM) Automated name-based View Maps
NAU5235 Marker Cotton 16,377,563 - 16,378,349 Cotton - E3 - 15 NAU5235 Marker 86.9 (cM) Automated name-based View Maps
Cotton - TH - 15 NAU5235 Marker 58.2 (cM) Automated name-based View Maps
NAU5138 Marker Cotton 62,419,025 - 62,419,814 Cotton - TH - 15 NAU5138 Marker 116 (cM) Automated name-based View Maps
NAU5085 Marker Cotton 15,951,799 - 15,952,597 Cotton - TH - 15 NAU5085 Marker 54.2 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU5085 Marker 64.4 (cM) Automated name-based View Maps
NAU4073 Marker Cotton 8,676,163 - 8,676,803 Cotton - TH - 15 NAU4073 Marker 46 (cM) Automated name-based View Maps
Cotton - E3 - 1 NAU4073 Marker 58.7 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU4073 Marker 137 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU4073 Marker 53.4 (cM) Automated name-based View Maps
NAU3736 Marker Cotton 55,835,234 - 55,836,030 Cotton - TH - 15 NAU3736 Marker 68.2 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3736 Marker 59.9 (cM) Automated name-based View Maps
Cotton - E3 - 1 NAU3736 Marker 73.2 (cM) Automated name-based View Maps
NAU3690 Marker Cotton 51,671,372 - 51,672,107 Cotton - Guazuncho2xVH8-RIL - c15 NAU3690 Marker 35.55 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU3690 Marker 76.9 (cM) Automated name-based View Maps
Cotton - TH - 15 NAU3690 Marker 66.8 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3690 Marker 63.4 (cM) Automated name-based View Maps
Cotton - GVc - 15 NAU3690 Marker 60.5 (cM) Automated name-based View Maps
NAU3576 Marker Cotton 43,443,124 - 43,443,659 Cotton - TH - 15 NAU3576 Marker 52.3 (cM) Automated name-based View Maps
NAU3543 Marker Cotton 838,625 - 839,174 Cotton - TH - 15 NAU3543 Marker 11.5 (cM) Automated name-based View Maps
NAU3496 Marker Cotton 53,228,348 - 53,229,093 Cotton - TH - 15 NAU3496 Marker 66.9 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3496 Marker 62.8 (cM) Automated name-based View Maps
NAU3433 Marker Cotton 55,462,914 - 55,463,587 Cotton - TH - 15 NAU3433 Marker 67.9 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3433 Marker 60.5 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU3433 Marker 79.6 (cM) Automated name-based View Maps
NAU3384 Marker Cotton 31,264,484 - 31,264,842 Cotton - TH - 1 NAU3384 Marker 72 (cM) Automated name-based View Maps
Cotton - E3 - 1 NAU3384 Marker 0 (cM) Automated name-based View Maps
NAU3254 Marker Cotton 60,699,225 - 60,699,812 Cotton - TH - 1 NAU3254 Marker 102.4 (cM) Automated name-based View Maps
NAU3188 Marker Cotton 47,380,140 - 47,380,804 Cotton - E3 - 15 NAU3188 Marker 78.9 (cM) Automated name-based View Maps
Cotton - TH - 15 NAU3188 Marker 66.8 (cM) Automated name-based View Maps
NAU3178 Marker Cotton 44,950,699 - 44,951,435 Cotton - TH - 15 NAU3178 Marker 64.9 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3178 Marker 66.9 (cM) Automated name-based View Maps
NAU3056 Marker Cotton 9,073,922 - 9,074,539 Cotton - E3 - 15 NAU3056 Marker 112.2 (cM) Automated name-based View Maps
Cotton - TH - 15 NAU3056 Marker 48.4 (cM) Automated name-based View Maps